Gene Dfer_5199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5199 
Symbol 
ID8228809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6268881 
End bp6270713 
Gene Length1833 bp 
Protein Length610 aa 
Translation table11 
GC content48% 
IMG OID644933048 
Productheat shock protein 90 
Protein accessionYP_003089562 
Protein GI255038941 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0326] Molecular chaperone, HSP90 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.661804 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.486638 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATCAG TGATTCAGGA AAAAGGGAAT TTGAGCATTC ACACCGAGAA CATCTTTCCG 
ATTATCAAGA AATTCCTTTA TTCGGACCAC GAAATTTTTC TTAGGGAACT TGTTTCCAAC
GCGGTTGACG CGTCACAAAA AATCAAAAAA CTGGCTTCGT ACGGGGAGTA CAACGGCGAG
CTGGGCGATC TGAAAGTGGT TGTTAAGCTG GATAAAGATG CCAAAACGAT CACGATCAGT
GACAATGGTA TCGGTATGAC AGCCGACGAG ATCAAAAAAT ACATTAACCA GATCGCTTTT
TCGGGAGCGA CTGAGTTTGT AGAGCAGTAC AAAGACAAAG GCGAAGGCGA CAAAGGCATT
ATCGGTCACT TTGGTTTGGG CTTCTATTCG GCTTACATGG TGGCCCAGAA TGTAGAGATC
ATTACAAAAT CCTACAAAGA AGGCGCTGAG CCGGTCCGCT GGGAATGCGA CGGTTCGACG
GAATTTGAAA TTTCGCCCGT TGAGAAGGCA GAACGCGGTA CCGACATTAT CCTGCACATT
GCCGAAGATT CCGAGGAATT TCTGGACGCA CACCGTTTGA GAGGCATTTT GGAAAAATAC
GGCAAATTCC TGCCGATCGA AATCGAGTTT GAAGACAAGG TGATCAACAA TCCGAGCCCG
ATCTGGACAA AAAGCCCTTC CGATCTGAAA GACGAAGATT ACCTCGCATT CTACAAAGAA
TTGCACCCAT TCAGCGAAGA TCCGCTTTTC TGGATCCATT TAAATGTGGA TTATCCATTT
AACCTGACCG GCGTACTTTA TTTCCCTAAA CTGCGCAACG ACTTCTCAGG CCAGCGTGAG
AAAATCCAGC TTTACAGCCG CCAGGTGTTC ATCACCGATG AAGTGAAGGA CATCGTTCCC
GACTTCCTGC AACTGCTGCA CGGTGTGATC GACTCGCCGG ATATTCCGTT GAACGTATCG
CGCAGCTACC TGCAAGCGGA TGGTAATGTG AAGAAAATCA ATGGCTACAT TACCCGCAAA
GTGGCCGATA AGCTGCTCGA AATCTTCAAA AACGATCGCG AGGGCTTCGA GAAGAAATTT
GATGATATCG GCTTGTTTGT CAAGTATGGC ATTATCAGCG ATGATAAATT CTATGAAAAA
GCGAAGGATT TCTGCCTGCT GAAAAATACC GACGGCAAAT ACTTCACTTT CGAAGAATAC
CGCGAGCATA TCAAGGAAAA CCAGACGGAC AAAAACGAAT CGCTCGTTTG GTTGTACACC
ACCGACGAGA AAAAGCAGGA TGCATTCATT CAATCGGCGA AGAAGCGCAG CTATGACGTG
CTTGTGCTGG ACACCGTGAT CGACTCGCAC TTCATCAATG CATTGGAGCA GAAGCTGGAA
AAAATCAGTG TGAAGCGCGT TGATGCCGAC ACGTTGGACA AACTGGTTGA AAAAGAAGTG
AAGCTGGAAA GCATTCTTTC TTCCGACGAT CAGGAGAAGG TGAAGAAGGT TTTTGAGGGC
ATTTCGGAGA ACAAAACGGC GCAGATTGCC GTGGAGGCCA TGCCGGTAGA CGAACTGCCG
GTGGTGATCA CTTTCCCGGA ATTCATGCGC CGCATGACGG ACATGCAGGC GAGCTCAGGC
CAGCGTTCGA TGTTTGGCGA TATGCCGCTG ATGTACACCG TTTCGCTGAA CTCGAACCAC
CCGCTGATCG GCAAGATCGC CGGCTCGGAT AATGAAGATG AGCAAAAGGC GCTGGCGAAG
CAGCTTTACG ATCTTGCATT GCTTTCGCAG GGAATGCTGT CGGGGAACGA CCTCACGCAG
TTTATCCAGA GAACGGTAGG TACACTTTCA TAA
 
Protein sequence
MESVIQEKGN LSIHTENIFP IIKKFLYSDH EIFLRELVSN AVDASQKIKK LASYGEYNGE 
LGDLKVVVKL DKDAKTITIS DNGIGMTADE IKKYINQIAF SGATEFVEQY KDKGEGDKGI
IGHFGLGFYS AYMVAQNVEI ITKSYKEGAE PVRWECDGST EFEISPVEKA ERGTDIILHI
AEDSEEFLDA HRLRGILEKY GKFLPIEIEF EDKVINNPSP IWTKSPSDLK DEDYLAFYKE
LHPFSEDPLF WIHLNVDYPF NLTGVLYFPK LRNDFSGQRE KIQLYSRQVF ITDEVKDIVP
DFLQLLHGVI DSPDIPLNVS RSYLQADGNV KKINGYITRK VADKLLEIFK NDREGFEKKF
DDIGLFVKYG IISDDKFYEK AKDFCLLKNT DGKYFTFEEY REHIKENQTD KNESLVWLYT
TDEKKQDAFI QSAKKRSYDV LVLDTVIDSH FINALEQKLE KISVKRVDAD TLDKLVEKEV
KLESILSSDD QEKVKKVFEG ISENKTAQIA VEAMPVDELP VVITFPEFMR RMTDMQASSG
QRSMFGDMPL MYTVSLNSNH PLIGKIAGSD NEDEQKALAK QLYDLALLSQ GMLSGNDLTQ
FIQRTVGTLS