Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_5137 |
Symbol | |
ID | 8228744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 6205626 |
End bp | 6206729 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644932985 |
Product | efflux transporter, RND family, MFP subunit |
Protein accession | YP_003089502 |
Protein GI | 255038881 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGTTA TCGCCAGATC TGCCCGTGCA GAAGGACTGC CAAATTTAAC CAAACCTCTG TCTTCACTTT TCATTGTCGG CTCTCTCTTC ATTACGCTTT CCTGCGGAGA AAAAAAGGAT ACTTTTCAAC AAAAAGGCGG CGGCGGACCG ACCATCGTCG ATGTGATCGT TGCGAAGTCC GAAAAGGTCA GTGATAAAGT CGAAGTCAAC GGCACCATCG TGGCCAACGA GTTCGCCGAA TTACGGCCCG AAGTAAGCGG ATTACTTACC TTCCTCGACG TTCCTGAGGG CAAAACAGTC CAAAAAGGAA CCGTCATCGC CAGAATCAAC AATGCCGACC TGCTCGCACA GCTGAACAGG TCCAAAATAC AGCTGGACCT GGCCGAAACA ACAGAAAAGC GGCTGAAACA GCTCATCGCG GTGAATGGCA TCAACCAGGC CGATTACGAC CTGGCCGCCA ACAACGTCAA TACCCTCAAA GCCGATATGG CCTACACCCA GGCGCTGATC GACAAAACGA TCATCAAAGC GCCGTTTACC GGAGTGGTAG GCCTGCGAAA AGTCAGCGAA GGCGCTTATG TGACCCCACA GAGCATTATC GCCACCATGC AGCAGCTTTC CAACCTGCGC ATTGATTTTA CCATTCCCGA AAGTTACCAG CAATACATCA GCAAGGGCGG CACCGTAGAA GTCATGCTCG ACCAGGCCTC GGGCAAGTAC GAAACGGCCC GCGTACTGGC AATAGAGCCA CAGGTGAACC AGACCACCCG CAATCTCACT GTCCGCGCGG TGCTGAGTTC GGGCAACACC AGCCCCGGCT CATTCGCCAA GGTGTACATC ACGGCCAGCA ATAACAAGAA TAGCATACTT ATTCCCTCCA ACAGCATTAT TCCCGAAGCA CGCAGCAAAA AGGTCGTGAC CGTGAAGGGC GGCAAAGCCG TTTTTGCGCA GGTAGAAACC GGCGACCGCC GGGAAGATGT GGTGGAAGTG ACGAAGGGCC TCAATGTAGG CGATACGGTG GTTGTCTCGG GCGTACTTTT TGCCCGGCCC GATGCTCCTG TGAAAGTGAG AAGTGTACGA AACCTGAATG TGGCGAGTAA GTAA
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Protein sequence | MNVIARSARA EGLPNLTKPL SSLFIVGSLF ITLSCGEKKD TFQQKGGGGP TIVDVIVAKS EKVSDKVEVN GTIVANEFAE LRPEVSGLLT FLDVPEGKTV QKGTVIARIN NADLLAQLNR SKIQLDLAET TEKRLKQLIA VNGINQADYD LAANNVNTLK ADMAYTQALI DKTIIKAPFT GVVGLRKVSE GAYVTPQSII ATMQQLSNLR IDFTIPESYQ QYISKGGTVE VMLDQASGKY ETARVLAIEP QVNQTTRNLT VRAVLSSGNT SPGSFAKVYI TASNNKNSIL IPSNSIIPEA RSKKVVTVKG GKAVFAQVET GDRREDVVEV TKGLNVGDTV VVSGVLFARP DAPVKVRSVR NLNVASK
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