Gene Dfer_5120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5120 
Symbol 
ID8228727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6183279 
End bp6184250 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content48% 
IMG OID644932968 
Productglycosyl transferase family 2 
Protein accessionYP_003089485 
Protein GI255038864 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.472906 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACC AAGCTATCCA GATTTCCGTT GTTATCCCGC TTTATAATGA AGAAGAGTCG 
CTGCCCGAGC TATGCGAGTG GATTGCGAGG GTTATGGACG AAAATCATTT CACGTACGAG
GTCCTGCTCA TGGATGATGG CAGCAGGGAC CGCTCCTGGG AGGTGATACA ACGGCTTTCA
CAGGAAAACC CCAATGTGCG CGGCATCCGT TTTGTGAGGA ATTATGGCAA AACAGCCGCA
TTGCAAACCG GTTTTCAGGC GGTAAAAGGG AATGTGGTAA TCACGATGGA TGCCGATTTG
CAGGACAGTC CGGACGAAAT ACCGGAACTG TACAGTTTGA TCGTCAACGA CCGTTATGAC
CTCATTTCGG GCTGGAAGAA AAAGCGCTAC GACCCCATCA CGAAAACGAT CCCTACGAAG
CTTTTTAATG CGGCCACGCG CCAGATCTCC GGCGTGCACC TGCACGACTT CAACTGTGGC
TTAAAGGCTT ACCGCAAGGA TGTCGTCAAG AATATCACTA TTTATGGAGA AATGCACCGC
TACATCCCGG TGATTGCGAA ATGGAATGGA TTCGCGAAGA TCGGGGAGAA GGTGGTGCAG
CACCGGGCAC GCAAATACGG TCACACAAAA TTCGGCCTCG AACGGTTCAT TTTTGGCTTT
CTGGATTTGC TTTCGATCGC CTTTGTGAAT AAGTTTGGAC GGAGACCGAT GCATTTGTTC
GGCAGTCTGG GAACTCTTAT GTTTTTTCTT GGAAGCCTTA TAGCAATGTG GTTGATCGGG
AAAAAAATAT ATAACATTTA CAATTTGTTG CCTTACCGGA ATGTTACCGA AAATCCGCTG
TTCTTTCTGG CGCTGGTGGC GGTGACGGTA GGCTCTCAAT TATTTCTCGC AGGATTTTTG
GGTGAATTGT TTGTAAAGCA AGCTGTTTCA AAAACAGGAG ACTACACGAT TGCCGAGAAA
GCAGGATTGT AG
 
Protein sequence
MTDQAIQISV VIPLYNEEES LPELCEWIAR VMDENHFTYE VLLMDDGSRD RSWEVIQRLS 
QENPNVRGIR FVRNYGKTAA LQTGFQAVKG NVVITMDADL QDSPDEIPEL YSLIVNDRYD
LISGWKKKRY DPITKTIPTK LFNAATRQIS GVHLHDFNCG LKAYRKDVVK NITIYGEMHR
YIPVIAKWNG FAKIGEKVVQ HRARKYGHTK FGLERFIFGF LDLLSIAFVN KFGRRPMHLF
GSLGTLMFFL GSLIAMWLIG KKIYNIYNLL PYRNVTENPL FFLALVAVTV GSQLFLAGFL
GELFVKQAVS KTGDYTIAEK AGL