Gene Dfer_5110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5110 
Symbol 
ID8228717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6173657 
End bp6174094 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content41% 
IMG OID644932958 
Productprotein of unknown function DUF820 
Protein accessionYP_003089475 
Protein GI255038854 
COG category[S] Function unknown 
COG ID[COG4636] Uncharacterized protein conserved in cyanobacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.10814 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.277047 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACTA TTATTGACGG AGCAGTTTCC ATTAACAAAG AATATACACA GATTATCAAC 
GGCAAAGAAA TTGATTTGCC ATGCCCGAAA ATGCCGCATC AGCGAGCCAT AACACAGCTC
CTGTACGTAC TTTACGATCA CTTGAAGACC CATCAATTGG GAACGCTTTG TCGTATCCCT
TACGACGTAA TCTTTAAAGA AAACTTCAAT GTCCTCCAAC CTGATTTATT TTTCGTATCA
AAAGAGCGTG AGAATATTTT GCAGGAAGCG GTTCACAGCA TGCCTAAGCT TGTCATCGAG
GTTGTTTCAC CTGAAATGCA TTACATAGAT ACTGTCGTCA AAAAAGACAT CTACGAAAGC
TACGGCGTAC CCGAATGCTG GCTCGTTTTG CCGGAAAAAA TTGGCATTGA AATATATGCC
CTGGTCAATG GCCGTTAA
 
Protein sequence
MKTIIDGAVS INKEYTQIIN GKEIDLPCPK MPHQRAITQL LYVLYDHLKT HQLGTLCRIP 
YDVIFKENFN VLQPDLFFVS KERENILQEA VHSMPKLVIE VVSPEMHYID TVVKKDIYES
YGVPECWLVL PEKIGIEIYA LVNGR