Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_5091 |
Symbol | |
ID | 8228698 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 6148501 |
End bp | 6149280 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644932939 |
Product | diaminopimelate epimerase |
Protein accession | YP_003089456 |
Protein GI | 255038835 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0253] Diaminopimelate epimerase |
TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000000217016 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.274183 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACATCC CGTTCTACAA ATACCAGGGA ACCGGAAATG ACTTTGTGAT GGTCGACGAC CGCAATCTGC AATTCCCGGT TTCCAAAGAG CTCATCGCCT CTATTTGCCA CCGCCGGTTC GGGGTGGGCG CTGATGGCCT CATTCTCCTT CAAAATGCCG AAGGATACGA TTTCCGTATG GTGTATTTCA ATGCCGACGG CGGCGAGGGC AGCATGTGCG GCAATGGCGG CCGCTGCGTG GTGCGTTTCG CGAACGACCT CGGGCTTTTT GATGGTAACA CGAAGTTCAT AGCCGTCGAC GGCGAGCACG AAGCCACTGT AACCGGCGAG GTGATCCGCC TCAAGATGTC GAATGTGAAT GGCGTGGAGC AATATGAAGA ATACGATTTC ATGAACACCG GCTCGCCGCA TTATGTGACG TACGTGGACG ATATCCACGA AGCGGATGTG GTAAACATCG GCAGCGAGAT CCGCTACGGC TCGGTATACG GCCCGAAAGG CGGCACGAAC GTCAATTTCG TGGAGGTGAT CGAAGACAAC CACCTGAGCG TGCGCACCTA TGAGCGCGGC GTGGAGGACG AAACGTTCTC GTGCGGCACG GGCGTAACCG CCTGCGCACT ATCCGCCCAC CTGCGCAAAG GCTGGCCCAG CCCGGTAACG GTGGAAACGA TCGGAGGCAC ATTGGCCGTC GAATACCAGG AAACGGGCGA AGGGCAGTTC AAAGACATTT ACCTGATCGG CCCCGCGGTG CGTGTGTTCG AAGGAAGTTT GAATGTGTAA
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Protein sequence | MNIPFYKYQG TGNDFVMVDD RNLQFPVSKE LIASICHRRF GVGADGLILL QNAEGYDFRM VYFNADGGEG SMCGNGGRCV VRFANDLGLF DGNTKFIAVD GEHEATVTGE VIRLKMSNVN GVEQYEEYDF MNTGSPHYVT YVDDIHEADV VNIGSEIRYG SVYGPKGGTN VNFVEVIEDN HLSVRTYERG VEDETFSCGT GVTACALSAH LRKGWPSPVT VETIGGTLAV EYQETGEGQF KDIYLIGPAV RVFEGSLNV
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