| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5071 |
|---|
| Symbol | |
|---|
| ID | 8228678 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 6124475 |
|---|
| End bp | 6125251 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644932919 |
|---|
| Product | alpha/beta hydrolase fold protein |
|---|
| Protein accession | YP_003089436 |
|---|
| Protein GI | 255038815 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.1456 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.556154 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACTCA ACTTCAAACA AATAGGAGAA ACCGGCAAGC CGCTCATCAT CCTGCATGGT
GTTTTCGGCT TTCTGGACAA CTGGCTGACG ATCGGAAAAA CGCTTTCCGA AAAAGGTTAC
CGCGTTTACC TCGTAGACCA GCGCAATCAT GGGCGCTCTC CGCACGAGGC ACCGCTCGAT
TTCCCCACCA TGGCAGCCGA TTTAAAGGAA TTTCTCGACC AGCAAAACAT CGGATCGCCG
ATCCTGATCG GACATTCGAT GGGCGGAAAA ACCGTGATGG AATATGCTGT TACCTATCCG
GGCACTTTCG AACGGCTGGT GGTGGTGGAC ATTGGCCCGA AAGCCTACCC GATCCACCAC
ACAAAAATCC TGAAAGGGCT GAATGCCATC CCGATCGACC GCATCGAAAG CCGCAACGAG
GCGGACGAAG TACTGGCCGA ATACGAACCG TTGCCCGGCG TGCGGCAGTT TTTGCTTAAA
AACCTGTACA GAAAGGATGA AGGCGGCTTT GCGTGGCGCT TTAATTTGCC GCTGCTCACG
ACCGATATGG CCAATGTAGG CAGGCAGATC ACGTCGGAAA GCCCGGTAGA AACCCCGGCA
TTGTTCATGC GCGGGGCTGA TTCGAATTAT ATTTTGGATG AAGATATGGA AGGAATTCTA
GACCTGTTCC CGAATGCGCA ACTGAAAACG ATCGAGGGCG CAGGACACTG GGTGCAGGCC
GAACAGCCGA AAGTATTCGT AAGCACCCTG CTGGAATTCC TGAACGAGGC TATCTGA
|
|---|
| Protein sequence | MQLNFKQIGE TGKPLIILHG VFGFLDNWLT IGKTLSEKGY RVYLVDQRNH GRSPHEAPLD
FPTMAADLKE FLDQQNIGSP ILIGHSMGGK TVMEYAVTYP GTFERLVVVD IGPKAYPIHH
TKILKGLNAI PIDRIESRNE ADEVLAEYEP LPGVRQFLLK NLYRKDEGGF AWRFNLPLLT
TDMANVGRQI TSESPVETPA LFMRGADSNY ILDEDMEGIL DLFPNAQLKT IEGAGHWVQA
EQPKVFVSTL LEFLNEAI
|
|---|
| |