Gene Dfer_5057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5057 
Symbol 
ID8228664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6111389 
End bp6112534 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content52% 
IMG OID644932905 
Productoxidoreductase domain protein 
Protein accessionYP_003089422 
Protein GI255038801 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAAA TCAAAGTTGG CGTTGTCGGA ACAGGCTTCA TTGGCCCCGC ACACATTGAA 
GCACTGAGAC GTCTTCCTAA TGTAGAAGTT GCCGCACTTT GCGAAGTGAC CGCAGAACTG
GCCAAGGAAA AAGCTGACGC GCTTGGCATT GCACGTTCCT ACACGTTCGA TGAACTGTTG
AAACAGGATG ACATTCAGGC GATCCACATT TGTACGCCTA ACTTCCTGCA CTACTCACAG
TCGAAAGCGG CATTGCTCGC CGGCAAACAC GTGATTTGTG AAAAACCATT GGCCAAAGAC
CTCGCAGAAG CGGAAGAACT CGTGGAACTG GCTGCCAAAA CCGGCCTTGT GAATGCGGTT
CACTTCAACC TGCGTTACTA CCCGCTGGCG CGCCAGATGA AATCGATGCG CGAAAAAGGC
GAACTAGGCG AGATTTATTC GTTCATCGGC TCTTACCTGC AAGACTGGCT GTTCTACAAC
ACCGATTATA ACTGGCGCCT CGAACCGGAC AAATCCGGCG ACTCGCGCGC GATCGCGGAC
ATCGGTTCCC ACCTGATGGA CATCCTGGAA TACATCACCG GCCTGAAAAC CGTTGCCGTT
TTCGCGGATT TCAACACCGT CCACAAAACC CGCAAAAAGC CTTTGAAAGC CGTTGAGACT
TACTCGGGCA AATTGCTGCA ACCGGAAGAC TACGCCGATG TACCCATCAA TACCGAAGAC
CACGCGAACG TTTTGCTGCG TTTCGACAAT GGGAACAAGG GGGTAATCAC CGTTTCTCAG
GTTTCGGCTG GCCGTAAAAA CCGCATGTCA CTGGAAATCT CCGGATCTAA AAAGACATTC
AGCTGGTGCT CCGAGTCTCC AAACGAACTC TGGATCGGCA ACCGCGACAA AGCGAACGAA
ATCCTTCTCC GCGACCCCTC GCTGGTAAAC GAAGACGTCC GCTCGACCAT CACCTTCCCA
GGCGGCCACA ACGAAGGCTT CCCGGACACT TCGAAACAAA TGTTCAAAGA AGTATACGCC
GCCATCGCAG AAGGCAAGCA ACCTGAAAAT CCAACATTCC CGACGTTCGC GGATGGGTAT
CGTGAGTTGC TGATTTGCGA GAAGATACTT GAAAGCAATA GAGCTGAGGC TTGGGTAACA
ATTTAA
 
Protein sequence
MNKIKVGVVG TGFIGPAHIE ALRRLPNVEV AALCEVTAEL AKEKADALGI ARSYTFDELL 
KQDDIQAIHI CTPNFLHYSQ SKAALLAGKH VICEKPLAKD LAEAEELVEL AAKTGLVNAV
HFNLRYYPLA RQMKSMREKG ELGEIYSFIG SYLQDWLFYN TDYNWRLEPD KSGDSRAIAD
IGSHLMDILE YITGLKTVAV FADFNTVHKT RKKPLKAVET YSGKLLQPED YADVPINTED
HANVLLRFDN GNKGVITVSQ VSAGRKNRMS LEISGSKKTF SWCSESPNEL WIGNRDKANE
ILLRDPSLVN EDVRSTITFP GGHNEGFPDT SKQMFKEVYA AIAEGKQPEN PTFPTFADGY
RELLICEKIL ESNRAEAWVT I