Gene Dfer_5025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5025 
Symbol 
ID8228631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6075752 
End bp6076846 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content51% 
IMG OID644932873 
ProductATP synthase F0, A subunit 
Protein accessionYP_003089390 
Protein GI255038769 
COG category[C] Energy production and conversion 
COG ID[COG0356] F0F1-type ATP synthase, subunit a 
TIGRFAM ID[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.436472 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATACCC ATCTGAGACG GTTTTTTACT ATCGCCCTTG TAGCGGCAAC ATGCGTTTTT 
AACCTCCCGG CCCGCGCCGA CGAACCTACT CAGCACGAGT CCGGCTCGGT TGCCCAGGCT
GTGAATGAGG AAGAGCATAA AATTGAACAT AAGCTTGAAG AGCACGAGGA AGAATTCAAC
ATCGGCGAGA TGATCATGCA CCACATTGCT GACTCGCACG AATGGGAATT CACCCACGGA
GTGGTACTTC CGCTCCCCGT GATTCTCTAC TCCGCCGACC GCGGTATCGA GGTGTTCTCC
TCGGCCAACT TCCACAACGA CCACCACGAA TACAATGGCT ACCATCTTGT ACATGGTGAT
TCAGAGCAGA TTGTGCCGGT GGACGAATCC CGCAAAATCT ACGACTTCTC GATCACCAAG
AACGTAGCTT CGATGCTCAT CAGCGCAGTG ATCCTGATCC TCGTTTTCAC GGGCGTTGCG
AGCTTCTACA AAAACGGCAA AGGCAAAGCG CCGAAAGGCT TCGCTTCCGC CATGGAAGTG
ATCATCCTCT TCATCCGCGA CGAAGTGGTG AAGCCGAACG TAGGCCCGAA ATACGAAAAA
TACCTGCCTT ACCTGCTCAC GTTGTTCTTC TTCATTCTGA TCAACAACAT CATGGGTCTG
CTTCCAGGCT CGGCTAACCT TACAGGTAAC ATCGCCGTAA CGCTTACACT GGCAGTACTT
ACTTTCATCG TGGTGCATTT GAATGCCAAT GGTAATTACT ACAAACACCT TCTGGCACCT
ACCGGCGTAC CCGCTCCGCT GTTGATCATC ATGATCCCGG TTGAAATCGT GGGTGTGTTC
ATGAAACCAT TCTCATTGAT GGTCCGGTTG TTCGCCAACA TCACCGCAGG TCACATTATC
CTTTTGAGCC TTTTCGGTCT GATCTTTATT TTCCAAAGCT TCGTGATCGC CCCGGTAATC
TCCCTGTTCG CATTGTTCCT GAACTTTATC GAGATCATGG TAGCGTTCAT CCAGGCATTC
ATCTTCACAC TATTGTCGTC CATGTACATC GGAAGCGCTA TCGAAGAGCA TAGCCACGCC
GACCACGGAC ATTGA
 
Protein sequence
MYTHLRRFFT IALVAATCVF NLPARADEPT QHESGSVAQA VNEEEHKIEH KLEEHEEEFN 
IGEMIMHHIA DSHEWEFTHG VVLPLPVILY SADRGIEVFS SANFHNDHHE YNGYHLVHGD
SEQIVPVDES RKIYDFSITK NVASMLISAV ILILVFTGVA SFYKNGKGKA PKGFASAMEV
IILFIRDEVV KPNVGPKYEK YLPYLLTLFF FILINNIMGL LPGSANLTGN IAVTLTLAVL
TFIVVHLNAN GNYYKHLLAP TGVPAPLLII MIPVEIVGVF MKPFSLMVRL FANITAGHII
LLSLFGLIFI FQSFVIAPVI SLFALFLNFI EIMVAFIQAF IFTLLSSMYI GSAIEEHSHA
DHGH