| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4910 |
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| Symbol | |
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| ID | 8228516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 5934283 |
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| End bp | 5936499 |
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| Gene Length | 2217 bp |
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| Protein Length | 738 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644932759 |
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| Product | ABC transporter related |
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| Protein accession | YP_003089276 |
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| Protein GI | 255038655 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR01193] ABC-type bacteriocin transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.948579 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.144734 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGGGG CGTTAACGGA TAAGCTGCCG TTTTTAAATG GCCGTCGCAG CCTGCGTTCG
GCGGTAATGA AGCAGCACGA TCTCACCGAT TGCGGCGCCA CATGCCTGGC GTCCATTGCC
GCTTTTTACA AACTTTCAAT TCCCGTGGCG CGTATCCGAC AGTACGCTTC CACGGACAAG
AAGGGCACGA ATGTGCTCGG GCTCATCGAA GCCGCCACAA AGCTGGGATT CAATGCCAAA
GGTGTGAAGG CCGACCTCCA ACAACTCCCG CATGTGCCTG TGCCCGCGAT TGCGCATGTG
ATCATCAAAG GCATTCTGCA CCATTATGTG GTGGTTTACC GCGTGAGTGC AACTGCCGTG
GAGGTCATGG ACCCGGCCCG CGGGGAACTG ATCGCCATGA CGCATGAAGA ATTCACGGGC
ATTTGGACGG GGGTACTGAT CCTCGTGCAG CCCGGCGACT CGTTTATGGA GGGTGATGAG
AAGATTTCGG TGAACAAACG GTTCTGGTAC CTGCTGATCC CGCACCGGTC TACATTGCTT
CAAGTGCTGC TGGGCGCCAT CATTTACACC ATTCTCGGGC TTTCTACCTC AATTTTCCTA
CAAAAAATCG TCGATAATGT GTTGCCGGAA GGTAACCGGA ACCTGCTCAA CCTGATGGGC
GTCGTGATGA TCTCGATCCT GGTTTTCAGG GTGGTGATCA ACCATGCGAA GAGTATATTG
ACGATCAAAA CCGGCCAGCA GATCGATGCG CGGCTGATTT TGGGCTACTA CAAGCATTTG
CTCCGGCTGC CGCAGCAGTT TTTCGATAAC ATGCGCGTCG GCGAGATCAT CTCGCGCATT
AACGACGCGG TGAAGATCAG GGTGTTTATC AATGATGTGC TTATCGGCTT TGCGGTAAAC
ATTTTCATCT TGCTGTTCTC GTTCGTGCTG ATGTTTACCT ATTACTGGAA ACTCGCATTG
ATCATGCTTG GCGTGGTGCC TTTGTACGCC GTGATTTACT ATTTCTCCAA CCGGATGAAC
AAAGCTACGC AGCGGAAACT GATGGAAAGT TCCGCCGAGC TGGAAGCGCA GCTGGTGGAA
TCGATCCATT CGGTGAGTAC CATTAAGCGG TTTGGGCTGG AAGATTTTAC GAATATGCGC
ACCGAAACGC GGTTTGTCGG AATGCTCCGG TCGGTGTACG AATCCAATAC CAACTCTTTG
TGGATCGGTG ATTTCAGCGG ATTTGTATCC AGTGCATTCA CGATTGTACT CCTCTGGGCA
GGGTCGGTTT TTGTTTTAAA CAACATTATC ACACCCGGTG AACTGCTATC ATTCTACGCG
ATCATCGGCT ATTTCACCGG TCCGGTCGCT AGCCTGATCG GCATGAACAA GATCATTCAG
GACGCGGCGA TCGCGGCCGA CAGGCTTTTT GAAATAATGG ACATCGAGCG CGAGTCGGTG
GAAAACCGGG CCGTTCTCAC GCCCGATATG ATCGGTGATA TCCATTTCAA AAACGTGCAT
TTCCGTTACG GCACCCGCGT TACCGTTTTC GAAGGCCTCG ATCTCACCAT TCCCAAAGGC
AAAATTACGG CGGTGGTAGG AGAAAGCGGC TCGGGTAAAA CGACTCTGCT GGCCTTGCTT
CAAAACATTT ATACAATAGA AAAAGGCAAC ATTCACATCG GAGGGTTCGA TATTAAATAC
CTGACTAACG ACAGTTTGCG GCAAATGGTA GGCGCCGTAC CGCAGGACGT CCATTTGTTT
GCCGGGAATG TTATCAACAA CATCGCCGTC GGGGAGTTTG AGCCGGATAT GAAAAAGATC
ATCTCCATTT GCCAGGAACT GGACATTATG AAGTTTATCG AAAACCTGCC GAACGGCTTC
AACACTTACA TCGGCGAAAA CGGCACCAGC CTTTCGGGCG GTCAGCGGCA GCGGCTGGCG
ATCGCACGGG CCCTCTACCG CGACCCTGAA ATCCTGATCC TCGACGAGGC GACCTCGTCG
CTCGATTCCA AATCCGAGCA GCATATCCAG CTGGCGGTGC AGGCTTTGCG CAAAAAGCAG
AAGACGATCA TCATCATCGC ACACCGGCTG AGCACGGTGA TGAATGCGGA CAAAATCGTG
GTGCTCGAAC AAGGGAAACT GGTGGAAGAG GGGAGTCACA AAAAGTTAAT GGCCAAAAAA
GGACGGTATT ACGGCATGTG GAGCCAGCAA TTTCCCTCAC TCGAAAGCGT AAACTGA
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| Protein sequence | MGGALTDKLP FLNGRRSLRS AVMKQHDLTD CGATCLASIA AFYKLSIPVA RIRQYASTDK
KGTNVLGLIE AATKLGFNAK GVKADLQQLP HVPVPAIAHV IIKGILHHYV VVYRVSATAV
EVMDPARGEL IAMTHEEFTG IWTGVLILVQ PGDSFMEGDE KISVNKRFWY LLIPHRSTLL
QVLLGAIIYT ILGLSTSIFL QKIVDNVLPE GNRNLLNLMG VVMISILVFR VVINHAKSIL
TIKTGQQIDA RLILGYYKHL LRLPQQFFDN MRVGEIISRI NDAVKIRVFI NDVLIGFAVN
IFILLFSFVL MFTYYWKLAL IMLGVVPLYA VIYYFSNRMN KATQRKLMES SAELEAQLVE
SIHSVSTIKR FGLEDFTNMR TETRFVGMLR SVYESNTNSL WIGDFSGFVS SAFTIVLLWA
GSVFVLNNII TPGELLSFYA IIGYFTGPVA SLIGMNKIIQ DAAIAADRLF EIMDIERESV
ENRAVLTPDM IGDIHFKNVH FRYGTRVTVF EGLDLTIPKG KITAVVGESG SGKTTLLALL
QNIYTIEKGN IHIGGFDIKY LTNDSLRQMV GAVPQDVHLF AGNVINNIAV GEFEPDMKKI
ISICQELDIM KFIENLPNGF NTYIGENGTS LSGGQRQRLA IARALYRDPE ILILDEATSS
LDSKSEQHIQ LAVQALRKKQ KTIIIIAHRL STVMNADKIV VLEQGKLVEE GSHKKLMAKK
GRYYGMWSQQ FPSLESVN
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