| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4857 |
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| Symbol | |
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| ID | 8228463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 5872310 |
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| End bp | 5874691 |
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| Gene Length | 2382 bp |
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| Protein Length | 793 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644932706 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_003089223 |
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| Protein GI | 255038602 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.586648 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.220658 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAAAGA ACTATTTCAA AATTGCCTTC CGGAACCTCT GGAAGCACAA GGTATTTTCA
CTGATCAACA TCCTCGGACT CACCGTAGGG ATGTCGGCCT GCCTGCTGAT TTCCATGTAC
GTCCATTTCG AGCTGACGTA CGACGCGTTC CACAGCAAGG CCGATCGCAT TTACCGCGTG
GTGACGGACA TTAAAACGCC TTCGGAGACG ATTCATGCGG GAATCACGTC GTGGGCTTAC
GCGCCCGCCA TGAAGCAGGA CTTCCCAGAG GTCGAATCCT TTGCGCGGAT CAATGGCGGG
AGCTTCCTGG TCCGAAAGGG TGATATCAAA TTTCAGGAAG AAGCGACGGT CTTTGCCGAC
TCGTCGCTTT TTCGTGTATT CGACTTCAAA TTAGTCAAAG GCGATCCCGG AACGGCGTTG
AAAGAGCCGC TAAGCATTGT TTTTACGGAA AAAGCGGCCA AAAAGTATTT CGGCGACAGC
GATCCGATCG GCCAAACACT GCTGCTCTCG GGCGATAGGC TTCCCGCCAA AGTTACCGGT
GTGATGCAGG ATATGCCCGA AAATTCGCAG ATCAAGGGCG ATATGTTCAT TTCGATGGCC
ACCATGACCC AGCGCTTCAA CCGGGGCGTC GACGAGGAAT GGGGAAATTT CGGCGCTACG
TCCTATGTGC TGCTGAAACC CGGGACAAAC AGCAAAGCAT TTGAAAAGAA GCTGCCTGCA
TTTATGGAGC GCCGCGCGGG CAAGCTCATG CAAGAGGCCA AAATGCGCTA CACGCTTTTC
CTCGAACCGC TGCGCGACGT GCATTTGCAT TCGACCCGCG ACGTGGCTGA AAAAGGAAGC
ATGAACAACG TGTATGTGTT TTCCGTCGTG GCGGTCTTCA TTCTGCTGAT CGCCTGCATC
AACTTCGTTA ACCTCACCAC CGCACGGTCG GCCGAACGGG CGCGCGAGGT AGGGATACGG
AAGGTCGTAG GCGCCGCCAG GTCTTTGCTG GCGCGGCAGT TTGTGAGCGA ATCGGTGATG
CTGTGCCTCA TTGCCTTCCT GTTTTCGGTA ATGCTTTCGG CCGCGCTTGT GCCGCTTTTC
AATAATCTGG CGGGAAAGGT GGTCGTTACC GGCCTTTTTG CCGATCCGTC GTTCCTGGTC
TATATGTTTT TGGCGGCGAT CGTGATCGGT GTGCTGGCGG GCATTTATCC GGCTTTGGTA
CTGTCGTCGT TTGAGCCGGT CACAGTGCTG AAAGGCCGTT TTACGACAAG TGTGAAGGGT
ATTTTATTAA GAAAAGGCTT GGTAACGGTC CAGTTTGCCA TTTCCATTGC CCTGATCATC
GCCACGATGG TCGTTTTCAT CCAAATGCGC TACATGCGCA ACCGCGATCT GGGTTTCAGC
AAGGATCAGA TGCTGGTCAT CAATACGGAG GGCGACCCGA AACGGGCGGC TTTCAAGGAA
TCGCTGGTGG GTCTCGCGGG CGTGAAATCC TCGGCTGCGT CGTCCAGCGT TCCGGGAAGC
TTTAATCCAG GCGCTTACTC CGAAATCGAG AACAAAAGCG GTGATTTGCA GGTCGCAAAC
CTGGATCTGT ATTTCGTCGA TTTCGACTAC ATTCACCAAT TTGGGCTCAA AATGGCTGCC
GGGAGGGCAT TTTCCAAAGA TTTTGGGACG GATACCACGC AGGCTATGGT CGTGAACGAA
GCCGCATCCA GGCTGCTGGG TTACGCCAGG CCGGAAGAGG CGCTGGGCCG CCGGTTCAGG
CAATGGGGGC GCGAGGGGAC GATCATTGGT GTGGTGAAAG ACTTCCATTT CAGGTCGTTG
CAGGAAAATA TCAAACCACT CACGATGCGG ATCGAGCCGC GTAACTCCGA CCTCGTATCC
GTAAAGATCG AGGGCGGACG GCTGAAAGAA ACCGTGGCGG CCATCGAAGA GAAATGGAAG
GGACTGATGC CCGACCGGCC ATTCAGCTAC TATTTCATGG ACGAATTTTT CGACCGGCAG
TACCGCAGCG AGGAGCGCTT TGAAAAGCTC TTCCTCAACT TCGCCATCCT GGCCATATTC
ATTTCCTGCC TCGGATTGCT GGGCCTGGCA TCGTACAGTA CCATGCAGCG CACGAAGGAA
ATCGGCGTGC GGAAAGTAAT GGGTGCGTCC GTTGCCAGCA TCGTGGCCCT GCTTTCACGG
GATTTTCTCA AGCTGGTCCT TATCGCATTT GTGGTCGCCT CGCCGGTTGC TTACTTCGGG
ATGGAGCGTT GGTTGCAGAA TTTCGCCTAT CGCACAGACA TTTATTGGTG GGTTTTCGCC
CTGGCGGCGG TGTTGTCCAC GGCCATTGCA TTTGGGACTG TAAGCTTCCA GAGCATCAAA
GCGGCCATAA TGAACCCGGT GAAAAGCCTT CGAAGCGAAT AG
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| Protein sequence | MLKNYFKIAF RNLWKHKVFS LINILGLTVG MSACLLISMY VHFELTYDAF HSKADRIYRV
VTDIKTPSET IHAGITSWAY APAMKQDFPE VESFARINGG SFLVRKGDIK FQEEATVFAD
SSLFRVFDFK LVKGDPGTAL KEPLSIVFTE KAAKKYFGDS DPIGQTLLLS GDRLPAKVTG
VMQDMPENSQ IKGDMFISMA TMTQRFNRGV DEEWGNFGAT SYVLLKPGTN SKAFEKKLPA
FMERRAGKLM QEAKMRYTLF LEPLRDVHLH STRDVAEKGS MNNVYVFSVV AVFILLIACI
NFVNLTTARS AERAREVGIR KVVGAARSLL ARQFVSESVM LCLIAFLFSV MLSAALVPLF
NNLAGKVVVT GLFADPSFLV YMFLAAIVIG VLAGIYPALV LSSFEPVTVL KGRFTTSVKG
ILLRKGLVTV QFAISIALII ATMVVFIQMR YMRNRDLGFS KDQMLVINTE GDPKRAAFKE
SLVGLAGVKS SAASSSVPGS FNPGAYSEIE NKSGDLQVAN LDLYFVDFDY IHQFGLKMAA
GRAFSKDFGT DTTQAMVVNE AASRLLGYAR PEEALGRRFR QWGREGTIIG VVKDFHFRSL
QENIKPLTMR IEPRNSDLVS VKIEGGRLKE TVAAIEEKWK GLMPDRPFSY YFMDEFFDRQ
YRSEERFEKL FLNFAILAIF ISCLGLLGLA SYSTMQRTKE IGVRKVMGAS VASIVALLSR
DFLKLVLIAF VVASPVAYFG MERWLQNFAY RTDIYWWVFA LAAVLSTAIA FGTVSFQSIK
AAIMNPVKSL RSE
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