| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4854 |
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| Symbol | |
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| ID | 8228460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 5868438 |
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| End bp | 5868989 |
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| Gene Length | 552 bp |
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| Protein Length | 183 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644932703 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003089220 |
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| Protein GI | 255038599 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.142713 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.100718 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAACC AGGACGACCG GATTCATATT GAGCAGGTAA AGCAGGGAAA CCTGGCTTCG
TATACCTACT TGGTCGACAA GTATAAGAAC ATGGCATTCA CCGTGGCGAA GAAAATCCTG
CCCAATACGC AGGACGCCGA GGATGCGGCG CAGGAAAGTT TCGTGAAGGC CTACATGCAG
ATCGGCAGCT TTGAGGGCAA GTCGAAATTC TCCACATGGC TCTACACGAT TGTTTACCGA
ACGGCGGTTT CCAAATTACA GGCGCGGCAA CTGGCATTGC AGCACATTGA TGAAGAACTG
GAACAAAACT ACGATTACCA ATACAGCCCG CCGCCGCTGG AAGCGCTGCA AACACGTGAA
CGAGAGCAGT TTGTGAAGGA TGCGATCAAC CGACTGCCCA AACTGGAAGC GCTGATCGTC
ACATTATATT ATCTCAATGA CAGCCCGATC GAGGAAATCG AACAAATCAC CGGCCTTTCG
AACAGCAATG TGAAAGTGAA GCTGTTCAGG GCGAGGAAGA TGCTGGGTAA AGAATTGCAT
TTTTTGTTAT AA
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| Protein sequence | MKNQDDRIHI EQVKQGNLAS YTYLVDKYKN MAFTVAKKIL PNTQDAEDAA QESFVKAYMQ
IGSFEGKSKF STWLYTIVYR TAVSKLQARQ LALQHIDEEL EQNYDYQYSP PPLEALQTRE
REQFVKDAIN RLPKLEALIV TLYYLNDSPI EEIEQITGLS NSNVKVKLFR ARKMLGKELH
FLL
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