Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_4776 |
Symbol | |
ID | 8228382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 5774453 |
End bp | 5775553 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644932625 |
Product | GTP-dependent nucleic acid-binding protein EngD |
Protein accession | YP_003089142 |
Protein GI | 255038521 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0012] Predicted GTPase, probable translation factor |
TIGRFAM ID | [TIGR00092] GTP-binding protein YchF |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.117268 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000704522 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTCTTC AATGTGGGAT TGTCGGATTG CCGAACGTTG GGAAATCCAC CCTTTTTAAT GCCATTTCTA CCGGCAAAGC CGAAGCTGCC AACTATCCAT TTTGCACCAT AGAGCCCAAT GTGGGCGTTG TGACCGTTCC CGACGAACGG CTGGATGTCC TCACCAAGCT GGTTAATCCC CAGAAAGTGA TCCCGACGAT CATCGAGTTC GTGGACATTG CCGGCCTCGT GAAAGGAGCG AGCCAGGGAG CAGGTTTGGG AAACAAATTT TTGGCTAATA TCCGCGAGGT AGATGCGATC GTGCACGTGG TGCGCTGCTT TGCAGATGAT AACGTTGTGC ACGTGGAAGG CCGCGTAGAC CCGGTTTTTG ACAAAGAAAT CATCGACGCA GAGTTGCAGC TGAAAGACCT GGAATCGATT GAAAAGAAAA TCCAGAAGAC GGAAAAAGGT GCACGCGCCG GGGATGCCAA AGCCAAAGCA GAGCTCGAAT GGTTGAAAAA ATATAAGTCG ACGCTGGAAG AAGGCAAGAA TGCGAGAGCC GTTGAAATCG ACCCCGAAAC AAGGGAATCG GTGATCGGCG ACCTGCAATT GCTTACTGCT AAACCGGTTC TTTATGTAGC CAATGTGGAC GAAGGTTCGA TGCTAACCGG TAATGAGTAT TCGGAAAAGC TCCGGGAAGC CGTGAAACAC GAAGGTGCGG ATGTGATTGT GCTTTGCGCG GCCATTGAAT CGCAGATTTC GGAAATCGAA GATCCCGAAG AGCATGAAAT GTTCCTGAGC GAGTACGGCC TGGCAGAATC GGGTTTGAGC AAGCTGATCA AAGCTTCTTA CGCGCTTTTG AACCTTATTA CCTATTTCAC AGCAGGCGTA AAGGAGGTTC GCGCCTGGAC GATCGTGAAA GGCTGGAAAG CCCCGCAGGC TGCCGGCGTG ATCCACAGTG ATTTTGAAAA AGGTTTTATT CGCGCCGAAG TAATTAAAAT TGCTGATTAT GAGCAGTATA AAACAGAACC CGCGGTGAAA GAAGCCGGTA AGATGGCGGT GGAAGGCAAG GAATACGTGG TTGCGGATGG TGACATTATG CACTTCCGGT TTAATGTGTA G
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Protein sequence | MSLQCGIVGL PNVGKSTLFN AISTGKAEAA NYPFCTIEPN VGVVTVPDER LDVLTKLVNP QKVIPTIIEF VDIAGLVKGA SQGAGLGNKF LANIREVDAI VHVVRCFADD NVVHVEGRVD PVFDKEIIDA ELQLKDLESI EKKIQKTEKG ARAGDAKAKA ELEWLKKYKS TLEEGKNARA VEIDPETRES VIGDLQLLTA KPVLYVANVD EGSMLTGNEY SEKLREAVKH EGADVIVLCA AIESQISEIE DPEEHEMFLS EYGLAESGLS KLIKASYALL NLITYFTAGV KEVRAWTIVK GWKAPQAAGV IHSDFEKGFI RAEVIKIADY EQYKTEPAVK EAGKMAVEGK EYVVADGDIM HFRFNV
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