Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_4772 |
Symbol | |
ID | 8228378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 5770922 |
End bp | 5772295 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644932621 |
Product | DNA repair protein RadA |
Protein accession | YP_003089138 |
Protein GI | 255038517 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1066] Predicted ATP-dependent serine protease |
TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.000283378 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCCAAAG CCAAAACGGC ATATTTTTGT CAGGAATGTG GGTATAATTC GCCAAAATGG GTCGGCAGAT GTCCGTCGTG CGGCGAGTGG AATACTTTCG TTCAGGAAGT GATCGAGAAG GACGACAAGA AGACAGCGGT GTCGTGGAAA TCGGTGAACC TGGCGAACAA GCCACGGTCG ATTGCCGAAA TTGTCTACGA AAATGAGCCG CGCATCCGCA CATTCGATGA GGAACTGAAC CGTGTGCTGG GTGGAGGTAT CGTGCCAGGG TCGTTGGTGC TGATTGGCGG AGAGCCGGGC ATCGGCAAAT CTACGTTGAT GCTGCAAATC GCATTGACGC TTTCTAATAA GAGGGTTCTG TATGTTTCCG GCGAAGAATC CGAGGCGCAG ATCAAAATGC GGGCGGAGCG AATGGCGGCC AAAAGCGACA ACTGCTTCAT CCTCACCGAC ACACAAACGC AAAATATTTT CAGACAAATA GAAGATTTCC AGCCCGAAAT CCTGATCGTC GATTCCATTC AAACCATGCA ATCGACCTAC ATCGAGTCGG GTGCGGGCAG CGTGTCGCAG GTGCGGGAAT GCACGGCGGA GTTTATGAAA TATGCCAAGG AAATGGGCGT GCCGGTGTTT TTGATCGGCC ACATTACCAA AGACGGCTCG CTGGCCGGCC CGAAAGTGCT GGAACACATG GTGGATACCG TGCTGCAATT CGAGGGCGAC CGGCACAATA CTTACCGCAT TCTGCGAACG ATGAAGAACC GCTTCGGAAG TACCTCCGAG CTGGGTATTT ATGAAATGCA GGGAAATGGC CTCCGGCAGG TGAGTAACCC TTCGGAAATC CTCATTTCGC AGCGCGACGA GCCGGTGAGC GGCATTGCGA TCGGCTCGAT GATGGAAGGC AATAGGCCAT TGCTGGTGGA AATTCAGTCG CTGGTGAGCG TGGCGACTTA CGGCACGCCG CAGCGTAGCA GCACCGGTTT CGATGCCAAA CGCTTGCAAA TGCTGCTGGC CGTGCTGGAA AAGCGCGGCG GTTTCCGGTT AGGCGTGCAG GATGTGTTTC TCAATGTGGC CGGCGGCTTG AAGGTCGAAG ATCCGGCGAT TGATCTGGCG GTGATCGCCT CGCTGGTGTC TTCCTATGAG GATAAATTCA TCCCGCCATC GGTATGTTTT GCGGCGGAAG TCGGGCTGGG TGGGGAAGTT CGTGCGGTGA ATCGCATTGA TAGCCGCGTT TCGGAGGCGG AAAAGCTGGG TTTTAAGAAG ATTTATATTT CAAAATACAA CAGCAAAGGG CTGGATTTGA AGCGGGGTAA AATTGAAGTG ATCCCGGTGG CGCATTTGGA TGAACTTTTT ATGTCGCTCT TTCTGAATCA GTAG
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Protein sequence | MAKAKTAYFC QECGYNSPKW VGRCPSCGEW NTFVQEVIEK DDKKTAVSWK SVNLANKPRS IAEIVYENEP RIRTFDEELN RVLGGGIVPG SLVLIGGEPG IGKSTLMLQI ALTLSNKRVL YVSGEESEAQ IKMRAERMAA KSDNCFILTD TQTQNIFRQI EDFQPEILIV DSIQTMQSTY IESGAGSVSQ VRECTAEFMK YAKEMGVPVF LIGHITKDGS LAGPKVLEHM VDTVLQFEGD RHNTYRILRT MKNRFGSTSE LGIYEMQGNG LRQVSNPSEI LISQRDEPVS GIAIGSMMEG NRPLLVEIQS LVSVATYGTP QRSSTGFDAK RLQMLLAVLE KRGGFRLGVQ DVFLNVAGGL KVEDPAIDLA VIASLVSSYE DKFIPPSVCF AAEVGLGGEV RAVNRIDSRV SEAEKLGFKK IYISKYNSKG LDLKRGKIEV IPVAHLDELF MSLFLNQ
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