Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_4763 |
Symbol | |
ID | 8228369 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 5758755 |
End bp | 5760530 |
Gene Length | 1776 bp |
Protein Length | 591 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644932612 |
Product | ABC transporter related |
Protein accession | YP_003089129 |
Protein GI | 255038508 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.116722 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0159357 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACCAGG AAACCAAAAG CGGCCAGATA TTCGATCTTC CTACTCTAAG GCGTCTATAC ACATTCGTTC GACCTTACCA GAAGCAGTTT TACCTGCTTA TTGCCATTAT ATTGCTCAAC GCGGTACTCG CGCCGCTCAC GCCCCTGCTG ATCAAATACA CGATCGACAC GCCCATTGCG AACGGCGATT ACTCGCAGCT GACGGTAATG CTCGTGGTAA TGCTGGTCGT TACCGTTTTG CAAGGTATTG CGCAGTTTTG GAACACCTAC ATGTCGGGCT GGCTCGGGCA GTACATTATC CGCGACATCC GCGTGCAGTT GTACGAGAAA ATCATTGGTT TAAGGCTCAA ATTCTTCGAT AACACGCCCA TAGGCCGCCT CGTAACGCGC ACCATTTCCG ACGTCGAAAC GCTTTCCAAT GTGTTCAGCG ACGGTATGGC CGCCATTGCC GGGGACATTC TGCAACTGGT GCTGATCATC GCCGTCATGT TTTACACCGA CTGGAAACTT TCGATCATCA GTCTGTCGAT GATCCCGCTG ATGCTTTTCT GTACCTATAT TTTCAAGGAG AAGATCAAAG ATTCGTTCAA TGAAGTGCGG GCAGCGGTTT CCAACCTTAA TGCATTTGTG CAAGAGCACA TTACCGGGAT GGGAATCGTG CAGATTTTCA GCAGTGAGGA CATAGAATAC AAGAAGTTCA GGGAGATAAA CAAGGTGCAC CGGAATGCGA ACATCCGGTC AATTCTCTAT TATTCCGTGT ATTATCCGGT GGCGGACGTG ATCGCCGCGG CGGGTACGGG TCTGGTGGTT TGGTACGGGT CCAAGCAAAT CCTGGGGGCA GAAATCACAT TCGGTACGGT TACGGCATTC GTGATGTTCA TTAATCTCTT CTTTCGCCCG ATCCGTCAGC TCGCCGACCG TTTCAACACC CTGCAAATGG GTATCGTGAG CACCGACCGC ATTCTGAAAC TGCTCGACAG CGACGAGTAC ACGGCCAACG AAGGCACATT TGCGCCGGAT TCGATCAAAG GGAATGTGGA GTTTAAAAAC GTGTGGTTCG CTTACAATGA CGAAGAGTAC GTTTTAAGGG ATATTAATTT TAATGTAAAA GAAGGGGAAA CGATCGCCTT CGTGGGTGCT ACCGGGGCCG GGAAATCTTC GATCATTAAC CTGCTTACCC GCTTTTACGA CATCAACAAA GGCAATATTT ACGTAGATGG CGTTGAAGTG CATGATTATG AGCTGAATGC ATTGCGCAAG CACATCGGTG TGGTGTTGCA GGACGTGTTC CTGTTTTCAG ATACCATTGA AAATAATATC CGCCTCGGCG ATCAGAGCAT TACCCACGAA AAAATCGTGG AAGCGGCCAA ATTGGTGGGC GTCCATGACT TCATCGAGCG CTTGCCCGGC GGCTATACCT ATAATGTAAT GGAACGCGGC GCGACGCTCT CGGTAGGGCA GCGGCAGCTC ATTTCTTTCG TCCGTGCAAT GGTCCACGAA CCTAAGATCA TCGTGCTCGA CGAAGCAACT TCGTCGGTCG ATAGCGAAAC GGAGGAATTG ATCCAGCACG CCATTGAAAA CCTGATGCAC GGTCGCACGG CGATCGTGAT TGCGCACCGG TTATCGACGA TCCAGGAGGC TGATAAGATT ATTGTCGTGG ACAAAGGGCG CATTGTGGAG GAAGGTAACC ACGAGCAACT GCTTGAAAAA GAAGGCGCTT ATGCAAACTT GTACCGGATG CAGTACAAGG AGGTGCATAA GATTGGGACT TTGTAG
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Protein sequence | MNQETKSGQI FDLPTLRRLY TFVRPYQKQF YLLIAIILLN AVLAPLTPLL IKYTIDTPIA NGDYSQLTVM LVVMLVVTVL QGIAQFWNTY MSGWLGQYII RDIRVQLYEK IIGLRLKFFD NTPIGRLVTR TISDVETLSN VFSDGMAAIA GDILQLVLII AVMFYTDWKL SIISLSMIPL MLFCTYIFKE KIKDSFNEVR AAVSNLNAFV QEHITGMGIV QIFSSEDIEY KKFREINKVH RNANIRSILY YSVYYPVADV IAAAGTGLVV WYGSKQILGA EITFGTVTAF VMFINLFFRP IRQLADRFNT LQMGIVSTDR ILKLLDSDEY TANEGTFAPD SIKGNVEFKN VWFAYNDEEY VLRDINFNVK EGETIAFVGA TGAGKSSIIN LLTRFYDINK GNIYVDGVEV HDYELNALRK HIGVVLQDVF LFSDTIENNI RLGDQSITHE KIVEAAKLVG VHDFIERLPG GYTYNVMERG ATLSVGQRQL ISFVRAMVHE PKIIVLDEAT SSVDSETEEL IQHAIENLMH GRTAIVIAHR LSTIQEADKI IVVDKGRIVE EGNHEQLLEK EGAYANLYRM QYKEVHKIGT L
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