Gene Dfer_4763 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4763 
Symbol 
ID8228369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5758755 
End bp5760530 
Gene Length1776 bp 
Protein Length591 aa 
Translation table11 
GC content50% 
IMG OID644932612 
ProductABC transporter related 
Protein accessionYP_003089129 
Protein GI255038508 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.116722 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0159357 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCAGG AAACCAAAAG CGGCCAGATA TTCGATCTTC CTACTCTAAG GCGTCTATAC 
ACATTCGTTC GACCTTACCA GAAGCAGTTT TACCTGCTTA TTGCCATTAT ATTGCTCAAC
GCGGTACTCG CGCCGCTCAC GCCCCTGCTG ATCAAATACA CGATCGACAC GCCCATTGCG
AACGGCGATT ACTCGCAGCT GACGGTAATG CTCGTGGTAA TGCTGGTCGT TACCGTTTTG
CAAGGTATTG CGCAGTTTTG GAACACCTAC ATGTCGGGCT GGCTCGGGCA GTACATTATC
CGCGACATCC GCGTGCAGTT GTACGAGAAA ATCATTGGTT TAAGGCTCAA ATTCTTCGAT
AACACGCCCA TAGGCCGCCT CGTAACGCGC ACCATTTCCG ACGTCGAAAC GCTTTCCAAT
GTGTTCAGCG ACGGTATGGC CGCCATTGCC GGGGACATTC TGCAACTGGT GCTGATCATC
GCCGTCATGT TTTACACCGA CTGGAAACTT TCGATCATCA GTCTGTCGAT GATCCCGCTG
ATGCTTTTCT GTACCTATAT TTTCAAGGAG AAGATCAAAG ATTCGTTCAA TGAAGTGCGG
GCAGCGGTTT CCAACCTTAA TGCATTTGTG CAAGAGCACA TTACCGGGAT GGGAATCGTG
CAGATTTTCA GCAGTGAGGA CATAGAATAC AAGAAGTTCA GGGAGATAAA CAAGGTGCAC
CGGAATGCGA ACATCCGGTC AATTCTCTAT TATTCCGTGT ATTATCCGGT GGCGGACGTG
ATCGCCGCGG CGGGTACGGG TCTGGTGGTT TGGTACGGGT CCAAGCAAAT CCTGGGGGCA
GAAATCACAT TCGGTACGGT TACGGCATTC GTGATGTTCA TTAATCTCTT CTTTCGCCCG
ATCCGTCAGC TCGCCGACCG TTTCAACACC CTGCAAATGG GTATCGTGAG CACCGACCGC
ATTCTGAAAC TGCTCGACAG CGACGAGTAC ACGGCCAACG AAGGCACATT TGCGCCGGAT
TCGATCAAAG GGAATGTGGA GTTTAAAAAC GTGTGGTTCG CTTACAATGA CGAAGAGTAC
GTTTTAAGGG ATATTAATTT TAATGTAAAA GAAGGGGAAA CGATCGCCTT CGTGGGTGCT
ACCGGGGCCG GGAAATCTTC GATCATTAAC CTGCTTACCC GCTTTTACGA CATCAACAAA
GGCAATATTT ACGTAGATGG CGTTGAAGTG CATGATTATG AGCTGAATGC ATTGCGCAAG
CACATCGGTG TGGTGTTGCA GGACGTGTTC CTGTTTTCAG ATACCATTGA AAATAATATC
CGCCTCGGCG ATCAGAGCAT TACCCACGAA AAAATCGTGG AAGCGGCCAA ATTGGTGGGC
GTCCATGACT TCATCGAGCG CTTGCCCGGC GGCTATACCT ATAATGTAAT GGAACGCGGC
GCGACGCTCT CGGTAGGGCA GCGGCAGCTC ATTTCTTTCG TCCGTGCAAT GGTCCACGAA
CCTAAGATCA TCGTGCTCGA CGAAGCAACT TCGTCGGTCG ATAGCGAAAC GGAGGAATTG
ATCCAGCACG CCATTGAAAA CCTGATGCAC GGTCGCACGG CGATCGTGAT TGCGCACCGG
TTATCGACGA TCCAGGAGGC TGATAAGATT ATTGTCGTGG ACAAAGGGCG CATTGTGGAG
GAAGGTAACC ACGAGCAACT GCTTGAAAAA GAAGGCGCTT ATGCAAACTT GTACCGGATG
CAGTACAAGG AGGTGCATAA GATTGGGACT TTGTAG
 
Protein sequence
MNQETKSGQI FDLPTLRRLY TFVRPYQKQF YLLIAIILLN AVLAPLTPLL IKYTIDTPIA 
NGDYSQLTVM LVVMLVVTVL QGIAQFWNTY MSGWLGQYII RDIRVQLYEK IIGLRLKFFD
NTPIGRLVTR TISDVETLSN VFSDGMAAIA GDILQLVLII AVMFYTDWKL SIISLSMIPL
MLFCTYIFKE KIKDSFNEVR AAVSNLNAFV QEHITGMGIV QIFSSEDIEY KKFREINKVH
RNANIRSILY YSVYYPVADV IAAAGTGLVV WYGSKQILGA EITFGTVTAF VMFINLFFRP
IRQLADRFNT LQMGIVSTDR ILKLLDSDEY TANEGTFAPD SIKGNVEFKN VWFAYNDEEY
VLRDINFNVK EGETIAFVGA TGAGKSSIIN LLTRFYDINK GNIYVDGVEV HDYELNALRK
HIGVVLQDVF LFSDTIENNI RLGDQSITHE KIVEAAKLVG VHDFIERLPG GYTYNVMERG
ATLSVGQRQL ISFVRAMVHE PKIIVLDEAT SSVDSETEEL IQHAIENLMH GRTAIVIAHR
LSTIQEADKI IVVDKGRIVE EGNHEQLLEK EGAYANLYRM QYKEVHKIGT L