| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4723 |
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| Symbol | |
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| ID | 8228329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 5708384 |
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| End bp | 5709712 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644932572 |
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| Product | xylose isomerase |
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| Protein accession | YP_003089089 |
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| Protein GI | 255038468 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2115] Xylose isomerase |
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| TIGRFAM ID | [TIGR02630] xylose isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATTC TACTCGGAGA ACAGGAGTAT TTTAAGGGTA TCGGAAAGAT CTCTTTCGAA
GGCCCCGAAA CCGACAACCC ACTGGCTTAC CGCTGGTACG ATGAAAACCG CGTTATAGCC
GGTAAAACGA TGAAAGATCA CCTGCGCTTC GCAGTGGCCT ACTGGCATAC ATTCTGTGGC
GCAGGTCTGG ACCCATTCGG CGGACCGACG CTTTTCTACC CTTGGGACAA GAAGGCCGAC
GCCGTTGACC GCGCCAAAGA CAAGGCCGAC GCCGCATTCG AATTCATCAC GAAGCTGGGC
CTGCCCTACT ACTGTTTCCA CGATGTGGAC GTAGTTGACT ACGACGACGA CGTACGCACC
AACGAAAAAC GCCTGCAAGC ATTGACTGCC TATTTGGGTG AAAAACAAAA GGCATCGGGC
GTGAAACTCC TTTGGGGAAC TGCCAACCTG TTCGGTCACC ACCGCTACAT GAACGGTGCT
TCCACCAACC CTGATTTCGA CGTGGTAGCA CATGCAGGTG CACAAATCAA AATGGCTCTG
GACGCTACCA TCGCGTTGGG CGGTGAAAAC TATGTGTTCT GGGGTGGCCG CGAAGGTTAT
ATGAGCCTTC TGAACACCGA TATGAAGCGT GAGCAGGAGC ACTTTGCCCA AATGCTGAAA
ATCTCCGTGG CTTATGCCCG TGCGAATGGC TTCAAAGGTA AATTCTTCAT TGAACCGAAG
CCTTGCGAGC CTACCAAGCA CCAATACGAC TACGATGCGG CAACGGTAAT CGGTTTCCTT
CGTCAGCACG ACCTGCTGGC CGATTTCAGC CTGAACCTCG AAGTAAACCA CGCCACATTG
GCCGGCCACA CTTTCGAGCA CGAACTACAA GTTGCTGCCG ACGCAGGCAT CCTGGGCTCG
ATCGACGCCA ACCGCGGTGA CTACCAGAAC GGCTGGGATA CCGATCAGTT CCCGAACGAC
ATCGCCGAAT GGACCCGCGC ATTGCTCGTG ATCCTGAATG CAGGCGGATT GCAGGGAGGC
GGTATCAACT TCGACGCGAA ACGCCGCCGC AACTCGACCG ACGTAGACGA TGTATTCCAT
GCGCACATCG GTGGTATCGA CACCGTGGCA CGTGCGCTGG TAATCGCCGA CAAGATCATC
CAGAACGGCG CTTACGACGA AATCCGCAAA AACCGCTACG CAAGCTTCGA CGGCGGCAAA
GGTGCAGATT TCGAAAAAGG TGCATTGAAA CTGGAAGACC TGTTTGAACT GGCTGCTACA
AAAGGCGAGC CTGCAACGAC TTCCGGCAAG CAGGAGTACC TCGAAAACCT GATCAACCGT
TTCCTTTGA
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| Protein sequence | MSILLGEQEY FKGIGKISFE GPETDNPLAY RWYDENRVIA GKTMKDHLRF AVAYWHTFCG
AGLDPFGGPT LFYPWDKKAD AVDRAKDKAD AAFEFITKLG LPYYCFHDVD VVDYDDDVRT
NEKRLQALTA YLGEKQKASG VKLLWGTANL FGHHRYMNGA STNPDFDVVA HAGAQIKMAL
DATIALGGEN YVFWGGREGY MSLLNTDMKR EQEHFAQMLK ISVAYARANG FKGKFFIEPK
PCEPTKHQYD YDAATVIGFL RQHDLLADFS LNLEVNHATL AGHTFEHELQ VAADAGILGS
IDANRGDYQN GWDTDQFPND IAEWTRALLV ILNAGGLQGG GINFDAKRRR NSTDVDDVFH
AHIGGIDTVA RALVIADKII QNGAYDEIRK NRYASFDGGK GADFEKGALK LEDLFELAAT
KGEPATTSGK QEYLENLINR FL
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