| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4703 |
|---|
| Symbol | |
|---|
| ID | 8228309 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 5675816 |
|---|
| End bp | 5676841 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644932552 |
|---|
| Product | glycoside hydrolase family 43 |
|---|
| Protein accession | YP_003089069 |
|---|
| Protein GI | 255038448 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3507] Beta-xylosidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.184013 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTAAGC CGCTCTTATC ACTACTATTA TCCGCCATGC TCACCGGCCT CGGTCCGGGC
GATAGAGAAT ACAAAAACCC CGTTTTCGAA CCCATTCTCG CCGACCCGAC GGTGGTGAAG
GCCGACGACG GCTACTTTTA CGCCTACGGA ACGCAGGACG ATTGGGGTGA CGGTAACGGC
TCGCGGCTCA TTCCGATCGT CCGTTCGAAA GACCTCGTGC ATTGGGATTA TGTGAAGGAA
GCATTTACAA CCAAGCCGGC ATGGAAGGAA AAAGGGGGTA TTTGGGCGCC TGATGTCGTG
AAAGTGAATG GTAAATACCA CATGTATTAC GCTTACTCCA CCTGGGGTGA CGTGAACCCC
GGCGTTGGCC TGGCCATTGC CGAATCGCCC GCGGGGCCGT TTGTGGATCA GGGAAAGCTG
TTCAACAGCG CGGACGTGGA AGTGCCGAAT TCGATCGACC CGTTTTACCT CGAAGCGGAT
GGTAAAAAAT ATGTTTTCTG GGGAAGTTTC AGCGATAAAC CTACACAGGG GACTTACGGC
GTGGAGCTTT CGGCTGATGG CAAAACCGTG CCCGATTTGT CCAAAAAATT CAAAATAGCG
GCAGGCGATT TCGAAGCTGT AATGATACAG AAAAAAGGCG ATTACTATTA CTTCCTGGGC
TCGAAGGGGA GCTGCTGCGA ATTTGAAAAG AGTAAATACC ATGTGCGGGT GGGCCGTTCC
AAATCTATTT TCGGGCCGTT TCTGGATCAG GAAGGCATGG ATTTGAAGGA ACGCGGCACG
GGCACACTGT TGCTCCAAGG CAATGATGTG TACGCCGGTC CGGGGCACAA TGCGCGCTGG
ATGACCGACG ATGCCGGCAC CGACTGGCTG CTATACCACG CCATCCCGAA ATCGGAACCG
CGGGTATCCA CCGGCGCCAA CCGCCGGGTG CTGATGCTCG ACAAACTGAC CTGGAAAAAT
GGCTGGCCGG AAATTTCCAA TGCAGAACCA AGCTTAGAAA ACCGGCCTGC GCCCCTTTTT
AAATAA
|
|---|
| Protein sequence | MIKPLLSLLL SAMLTGLGPG DREYKNPVFE PILADPTVVK ADDGYFYAYG TQDDWGDGNG
SRLIPIVRSK DLVHWDYVKE AFTTKPAWKE KGGIWAPDVV KVNGKYHMYY AYSTWGDVNP
GVGLAIAESP AGPFVDQGKL FNSADVEVPN SIDPFYLEAD GKKYVFWGSF SDKPTQGTYG
VELSADGKTV PDLSKKFKIA AGDFEAVMIQ KKGDYYYFLG SKGSCCEFEK SKYHVRVGRS
KSIFGPFLDQ EGMDLKERGT GTLLLQGNDV YAGPGHNARW MTDDAGTDWL LYHAIPKSEP
RVSTGANRRV LMLDKLTWKN GWPEISNAEP SLENRPAPLF K
|
|---|
| |