Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_4661 |
Symbol | |
ID | 8228267 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 5623228 |
End bp | 5624007 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644932510 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003089027 |
Protein GI | 255038406 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0024657 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.944766 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACTAT CTACCTCCAC ATCCCTCATC ACCGGAGGCG CCTCCGGCCT TGGCGAAGCG ACTGCGCGAT TATTTGTAAG TCAAGGGTCA AAAGTGGTCA TCCTTGACCT CAACGAAGCA GCCGGACAGG CACTGGAAAG CCAATTCCCG GATCAAATCA AATTCATCAA AACCGACGTT ACCAGCGAAA GCGAAGTCCA ACTCGCTTTG GATGCTGCAT TGCTAACTTT TGGCAGCATT CAGATTGTGG TGAACTGTGC GGGCATCGCG CCGGCGCGAA AGATCGTGGG GAAAGCGGAT GGCATTTATG GGCCGCATGC TTTTGAGCTT TTTGAAAAAA CCATCCGCAT TAACCTGATG GGCACATTTA ATGTGATGCG ACTGGCGGCT TTTGCGATGG AAAAGAACGA GCCGAATGCG GAAGGTGAGC GTGGTGTGAT CATTAATACG GCTTCCGTAG CGGCTTATGA CGGCCAAATG GGCCAGGTTG CCTATGCTGC CAGCAAAGGC GGCATTGTGA GTATGACGCT GCCGGTGGCG CGAGACCTCG CGAAATCCGG CATTCGGGTG ATGGCGATTG CGCCGGGGCT GTTCGAAACG CCGCTGCTCA TGGGCCTGCC CGAAGAAGCG CGCGCTTCAT TGGGGCAGCA GATTCCATTT CCATCCCGGC TGGGAAAGCC TTCTGAATAT GCATTACTGG CCAAATCTAT TGTGGAAAAC CCGATGCTGA ACGGCGAGGT GATCCGCTTG GACGGAGCAA TCCGGATGGC TCCCAAATAG
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Protein sequence | MQLSTSTSLI TGGASGLGEA TARLFVSQGS KVVILDLNEA AGQALESQFP DQIKFIKTDV TSESEVQLAL DAALLTFGSI QIVVNCAGIA PARKIVGKAD GIYGPHAFEL FEKTIRINLM GTFNVMRLAA FAMEKNEPNA EGERGVIINT ASVAAYDGQM GQVAYAASKG GIVSMTLPVA RDLAKSGIRV MAIAPGLFET PLLMGLPEEA RASLGQQIPF PSRLGKPSEY ALLAKSIVEN PMLNGEVIRL DGAIRMAPK
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