Gene Dfer_4578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4578 
Symbol 
ID8228182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5524368 
End bp5524868 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content48% 
IMG OID644932425 
Productferric uptake regulator, Fur family 
Protein accessionYP_003088944 
Protein GI255038323 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.622664 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.843285 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACAAG CCAGCAAACC AAATTTCGAG GCCGCTAAGA AAATATTAAC GGCTTACCTG 
GAAAATAAGG GACTTCGTAA AACGCCCGAG CGCTTTGCGA TTTTGGAGGA GATTTACACC
CGGGAAGATC ATTTCGATGT AGATGAGCTG TACATCAGCA TGAAGAACAA GCGCTACCGC
GTAAGCCGTG CCACCGTTTA TAACACGCTC GACGTGCTCG TGGATTGCGA CCTGGTTACC
AAGCATCAGT TCGGCAAAAA CCTGGCGCAA TTCGAAAAAT CGTACGGTAA CAAGCAGCAC
GACCATTTGA TTTGTACAGA TTGTCATAAA GTAATGGAAT TCTGCGATCC GCGTATCCAG
TCGATCCAGA ACATGGTAGG GGAAATGCTG AATTTCAGCG TCATGCACCA CTCGCTTATT
TTCTACGGAA ACTGCAATAA GGAAAATTGC CAGAACCGCA CCGATGCACC GCGGGAAACC
GCCGTTTTCG AAGACAGATA A
 
Protein sequence
MPQASKPNFE AAKKILTAYL ENKGLRKTPE RFAILEEIYT REDHFDVDEL YISMKNKRYR 
VSRATVYNTL DVLVDCDLVT KHQFGKNLAQ FEKSYGNKQH DHLICTDCHK VMEFCDPRIQ
SIQNMVGEML NFSVMHHSLI FYGNCNKENC QNRTDAPRET AVFEDR