Gene Dfer_4554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4554 
Symbol 
ID8228157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5496825 
End bp5497865 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content52% 
IMG OID644932400 
Productintegral membrane protein 
Protein accessionYP_003088920 
Protein GI255038299 
COG category 
COG ID 
TIGRFAM ID[TIGR00374] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.459798 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATA TACTGCGTTA CACGATATCG CTTGTCCTGG CAGGCGGTCT GCTCTGGTTT 
GTGTTTAAAG ACATCAACCT GGGCGAAATG CTCGACCGTT TTGCGAAATC CGACTGGCGG
TGGATCGCCG TATCATGCTT TTGCCTCCTG CTTGCGCACA TGACGCGCGC CTGGCGTTGG
GGAATGCTCA TCGAGCCGCT GGACCACAAG CCGGGCATTG TGAACAGCAC AATGTCTGTA
CTCACCGGGT ATTTTGCCAA TTATATTGTT CCAAGAATGG GCGAGGTAAC ACGCTGCGGC
ACATTATACC GGCTTGAACG CATTCCGGTG AGCCTGAGCT TTGGTACCGT GGTGGCCGAG
CGGATTTTCG ATGTGATCAT ACTGGTGTTG ATGATCGGGT TGAACTTCAT CCTCGAATTC
GATCGTCTCA GCACATTCTT CACTGATTTT TTCCAAAGTA AAATAGGCGG CGGAAGCCAG
GGCGGCGGCT CGGGCAGCGG CATGCTGCTT ACAGTTTTGA TCGTCGGGTT ACTGGCTGTT
GGCGTGGCGG CTACTGTAAT TTTCAGGAAT GTCGCGTTGC GTAATAAATT GCAGCAGAAT
GCGCTTGTTG CCAAAATCAT CAGCTTTGCC CAGGGCATGC TGGAAGGTTT GCTGAGCGTT
CGCAAGCTGC GTAATCCGGG ACTATTCATT TTCAGCACGG TGATGATCTG GGTATTGTAT
TATCTGGTCT CGTACGTGCT TTTCTTCTGC ATTCCCGAAA CTTCCCACCT CGGCCCGCTG
GCGGGTTTGA CGCTGCTCGT CGTGGGGGCG ATCGGTATGA CGGCGCCTAC GCAGGGCGGG
ATCGGTGCAT ATCATTTGCT CGTGGGTAAT GTGATGGTGC TGTACGGACT GTCGCAGAAC
GACGGCATCA CATTGGCGAC ATTCATCCAC GGCGCGCAAA TGCTGTTTAT GCTCGTCATC
GGTGCATTGG CATTCTTGTA TGTGCTGATT GTGAACAAAA ACAAAGTCGA AACGACCGAA
CAAGTGTCCG CGGCAAACTA A
 
Protein sequence
MKNILRYTIS LVLAGGLLWF VFKDINLGEM LDRFAKSDWR WIAVSCFCLL LAHMTRAWRW 
GMLIEPLDHK PGIVNSTMSV LTGYFANYIV PRMGEVTRCG TLYRLERIPV SLSFGTVVAE
RIFDVIILVL MIGLNFILEF DRLSTFFTDF FQSKIGGGSQ GGGSGSGMLL TVLIVGLLAV
GVAATVIFRN VALRNKLQQN ALVAKIISFA QGMLEGLLSV RKLRNPGLFI FSTVMIWVLY
YLVSYVLFFC IPETSHLGPL AGLTLLVVGA IGMTAPTQGG IGAYHLLVGN VMVLYGLSQN
DGITLATFIH GAQMLFMLVI GALAFLYVLI VNKNKVETTE QVSAAN