Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_4455 |
Symbol | |
ID | 8228058 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 5373043 |
End bp | 5374563 |
Gene Length | 1521 bp |
Protein Length | 506 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644932301 |
Product | RagB/SusD domain protein |
Protein accession | YP_003088821 |
Protein GI | 255038200 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000000846539 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.670617 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACTTT CTAAGATCAC AAGCGATATG AAAAATATAA GTTTTAAAAC CAATTTGAAG CAAAAAGGGC TTTATCTGGG GCTGGCAGCG CTCCTGATCG TCCCTTCCTC TTGCAGCGAC AGCTTCCTCG ACGTGGACCC GCAGGGTAAG CAGCCGGGCG TGGTGTTCTG GCAAAACGAG GCTGACGCCA CGAAAGCGGT GAATGCGATG TATGCCAATC TCCGCAGCTG GAACAATACC GCATTCGCGG CCATTGCCAT CGAAAGCATC GGCTCGGACG ATGCCGAAAA AGGCAGCACG GCTTCCGACG CGACGTTCTT TAACCAATAC GACACCTTCA CCGTGGGCTC CACAGAAGGC CAGCTGGGCG GTTTCTGGGA AGGCCAATAT CAGAATATCA ACTACGCCAA TCAAGTGCTG GACAACATTC CGGCGATCAG CATGGACGAA ACGCTGAAAA CGCGGTATTT GGCAGAAGCG AAATTCGTTC GTGCATACTC CTACTTCCGC CTCGTAAGGG CATTCGGTGA TGTGCCTTTG CGTTTGACGG TGCCGAAGGA TGCGACAGAG TACAACCTGC CGCGCACACC CAAAGCGGAT GTGTATGCGG CTATTGAGAA AGATCTGACG GAAGCTGCGG CTGTGCTCCC GGCTAATTAT GGCGCCGCCG ACCTTGGCCG TGCGACCAAA GGTGCTGCGC AGTCACTGCA CGCCAAGGTA TCCATGTACC AGGCCAAGTG GCAGCAGGTT TTTGACCTCA CCACACAGGT GATCAGCTCC GGCCAGTACT CGCTGGTAGC CGATTACGAA GCATTGTTCC GCATTCAGAA TGAGAATTCG AGAGAGTCGG TTTTTGAAAT TCAGAACGAG CTTGTCCCTT CTAACAAAGA CGCTTCGAAC TCGCAATATT CGCAGGTGCA GGGGGTAAGA GGCGTACAAG GCGGCGGCTG GGGCTTTAAT GTGCCTACGG AAGAGCTTTC CAAAGCATTC GAAGCGGGCG ACCCGCGCCG CGATGCGACC ATTATCTTCC GCGGCGAAAC CACTCCTTCG GGTGATGCGA TTGCGGCAAC CGGCGATAAC CCGATGTACA ACCAGAAATC CTACGTGCCG TTCAAACTGT TTGTAACAGG TTTTAACGAA GGTGCGCAGC AGAATGTGCG GGTGATCCGC TATGCCGACG TGTTGCTGAT GAATGCGGAA GCGGCAAATG AGATCGGAAA CACCACTCAG GCGCTCGCTT CACTCGAACT GGTGCGTGCC CGTGCCCGCG GAGCCAGCAA AACGATCCTG CCGAAAATTA CGACCACCGA CAAGGCTGCT TTGCGCACGG CCATCTGGAA CGAACGCCAT TACGAACTCG CAATGGAAAA CGACCGCTAT TTCGACGTGA TCCGCCAGGG CCGCGCTGCG CAGATCTTTG GACCGAAAGG CTGGAAAGCG GGTAAAAACG AAGTATGGCC GATCCCGCAG AACGAAATCG ACATTAGTGC AGGTGTATTG ACCCAAAACC CAGGTTATTA A
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Protein sequence | MSLSKITSDM KNISFKTNLK QKGLYLGLAA LLIVPSSCSD SFLDVDPQGK QPGVVFWQNE ADATKAVNAM YANLRSWNNT AFAAIAIESI GSDDAEKGST ASDATFFNQY DTFTVGSTEG QLGGFWEGQY QNINYANQVL DNIPAISMDE TLKTRYLAEA KFVRAYSYFR LVRAFGDVPL RLTVPKDATE YNLPRTPKAD VYAAIEKDLT EAAAVLPANY GAADLGRATK GAAQSLHAKV SMYQAKWQQV FDLTTQVISS GQYSLVADYE ALFRIQNENS RESVFEIQNE LVPSNKDASN SQYSQVQGVR GVQGGGWGFN VPTEELSKAF EAGDPRRDAT IIFRGETTPS GDAIAATGDN PMYNQKSYVP FKLFVTGFNE GAQQNVRVIR YADVLLMNAE AANEIGNTTQ ALASLELVRA RARGASKTIL PKITTTDKAA LRTAIWNERH YELAMENDRY FDVIRQGRAA QIFGPKGWKA GKNEVWPIPQ NEIDISAGVL TQNPGY
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