Gene Dfer_4439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4439 
Symbol 
ID8228042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5357171 
End bp5357683 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content57% 
IMG OID644932285 
Productsingle-strand binding protein 
Protein accessionYP_003088805 
Protein GI255038184 
COG category[L] Replication, recombination and repair 
COG ID[COG0629] Single-stranded DNA-binding protein 
TIGRFAM ID[TIGR00621] single stranded DNA-binding protein (ssb) 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGAA GCGTTAACAA AGTAATTCTG ATAGGCAACC TGGGCAGCGA TCCGGAGGTT 
CGTTACCTGG AAAGCGGTTC CGCTGTGGCG AAATTCAATA TCGCGACCAC GGAAACTTAC
ACCAACAAAA ACGGTGAGCG TGTAGACAAT ACCGAATGGC ACCGCATCGA GCTTTGGGAA
GGATTGGCCA AAGTAGCCGA GAAATACCTT AAAAAAGGAA ACCAGGTGTA CATCGAAGGA
CGTATCCGCA CGGACACCTG GACCGACAAG GAAGGCCAGC AGCGCACCGG AGTAACCATC
CGCGCGAACA GTATGACATT ACTGGGCGGT CCGTCGGGCG GCGGTCCGTC AGGCGGCGGC
AATTCTGGCG GCGATTACAA CCAGGGAGGC CAGCAAGGCG GTTACCAGCA ATCGGGCAAT
GCACCGCGCT CCAACAACGG CCCGCGACCG TCGGACCCGA TACCGCCATC GATGGCAGCC
GGCAGCAACG ACGACGACGA TTTGCCGTTC TGA
 
Protein sequence
MAGSVNKVIL IGNLGSDPEV RYLESGSAVA KFNIATTETY TNKNGERVDN TEWHRIELWE 
GLAKVAEKYL KKGNQVYIEG RIRTDTWTDK EGQQRTGVTI RANSMTLLGG PSGGGPSGGG
NSGGDYNQGG QQGGYQQSGN APRSNNGPRP SDPIPPSMAA GSNDDDDLPF