Gene Dfer_4412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4412 
Symbol 
ID8228015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5330493 
End bp5331056 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content55% 
IMG OID644932259 
Productthioesterase superfamily protein 
Protein accessionYP_003088779 
Protein GI255038158 
COG category[I] Lipid transport and metabolism 
COG ID[COG1607] Acyl-CoA hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACATGG AGCCCAGGCC CGTCAGCTTT TCCCAAACCA CCCTCACCGA ACTCATGATC 
CCTTCCTATG CCAATTTTGG CGGGAAAATC CACGGAGGTA TTCTGTTATC ACTGATCGAC
AAGGTCGCGT ACGCATGTGC GTCGCGGCAT GCGGGAACTT ACTGCGTGAC GGTTTCGGTG
GATGGCGTGG ATTTTCTTCA ACCGGTGGAA GTGGGTGACC TCGTGTCGCT GCACGCGTCG
GTGAATTACG TGGGACGCAC GTCGCTAGTG GTGGGCATCC GGGTAATAGC TGAGAACGTG
CGTAACCGTA CGGTAAGGCA TACCAACACT TCGTACGTTA CAATGGTCGC CAAGGACGAT
GATAACAAGC CGACTGCTGT GCCTGAGCTG CTGCTGGAAA ATGAAGGCGA CGCGCGGCGG
TTTCTGGAAG CGATCAAGCG GCGGGAGTTA AGGGAGCAAT ATCGGGACGC GTTCGACAAT
GCCAAAACGC GTCTCGATGT GCCGCATAAC CTGGATAAGC TCGCCAGGGA GCGTTGTGTT
ATCGGATTTG ACGGGGACGT TTAA
 
Protein sequence
MHMEPRPVSF SQTTLTELMI PSYANFGGKI HGGILLSLID KVAYACASRH AGTYCVTVSV 
DGVDFLQPVE VGDLVSLHAS VNYVGRTSLV VGIRVIAENV RNRTVRHTNT SYVTMVAKDD
DNKPTAVPEL LLENEGDARR FLEAIKRREL REQYRDAFDN AKTRLDVPHN LDKLARERCV
IGFDGDV