Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_4412 |
Symbol | |
ID | 8228015 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 5330493 |
End bp | 5331056 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644932259 |
Product | thioesterase superfamily protein |
Protein accession | YP_003088779 |
Protein GI | 255038158 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1607] Acyl-CoA hydrolase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCACATGG AGCCCAGGCC CGTCAGCTTT TCCCAAACCA CCCTCACCGA ACTCATGATC CCTTCCTATG CCAATTTTGG CGGGAAAATC CACGGAGGTA TTCTGTTATC ACTGATCGAC AAGGTCGCGT ACGCATGTGC GTCGCGGCAT GCGGGAACTT ACTGCGTGAC GGTTTCGGTG GATGGCGTGG ATTTTCTTCA ACCGGTGGAA GTGGGTGACC TCGTGTCGCT GCACGCGTCG GTGAATTACG TGGGACGCAC GTCGCTAGTG GTGGGCATCC GGGTAATAGC TGAGAACGTG CGTAACCGTA CGGTAAGGCA TACCAACACT TCGTACGTTA CAATGGTCGC CAAGGACGAT GATAACAAGC CGACTGCTGT GCCTGAGCTG CTGCTGGAAA ATGAAGGCGA CGCGCGGCGG TTTCTGGAAG CGATCAAGCG GCGGGAGTTA AGGGAGCAAT ATCGGGACGC GTTCGACAAT GCCAAAACGC GTCTCGATGT GCCGCATAAC CTGGATAAGC TCGCCAGGGA GCGTTGTGTT ATCGGATTTG ACGGGGACGT TTAA
|
Protein sequence | MHMEPRPVSF SQTTLTELMI PSYANFGGKI HGGILLSLID KVAYACASRH AGTYCVTVSV DGVDFLQPVE VGDLVSLHAS VNYVGRTSLV VGIRVIAENV RNRTVRHTNT SYVTMVAKDD DNKPTAVPEL LLENEGDARR FLEAIKRREL REQYRDAFDN AKTRLDVPHN LDKLARERCV IGFDGDV
|
| |