| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4370 |
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| Symbol | |
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| ID | 8227973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 5283266 |
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| End bp | 5284234 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644932217 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_003088737 |
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| Protein GI | 255038116 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.772883 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCTGATA AGGTCGTCAT GGAGAAAGCA GACGACTTTC ACGGGTTGTT TGAGTTTAAG
CCTTTAGAGA AAGGATACGG CGTAACCATT GGTAATGCGT TGCGTAGGAT TCTCCTTTCA
TCTTTGGAAG GCTATGCCAT CACGAGTGTG AAGTTCCCAG GCGTGCTTCA CGAATTTTCT
TCTATCGAAG GTATAGTTGA GGATGTTACG GAAATCATCC TGAACCTTAA AATGGTTCGT
TTTAAAAAAG TTTCTGACCT GAGTGAGAGT AGGATCGTAG TAAACCTGAA AAATGTTTCC
GTCATCACTG CCGGTGACAT TGGCAAGTTT ACAAGCGCAT TTGAGGTTTT GAACCCAGAT
CAGGTCATTT GCCATATAGA TGATCAGAAG GAGTTCGAAA TGGAACTTCT CCTGGATAAA
GGCAGAGGCT ACGTGCCTGC AGACGAACCA CGGGCTAATG AGCTTCCGTT CGGCTACATC
GCGGTAGACT CGATTTATAC GCCTATCAAA AATGTGAAAT ACAGCGTTGA AAACACGCGT
GTGGAACAGC GTACCGACTA CGAACGTCTT TTGATCGACA TCCAAACCGA TGGTTCAATC
CACCCGGAAG ATGCATTGAA AGGCGCTGCC AATATTCTGA TCCAACACTT CATGCTGTTC
TCCGACCAAA CTATGACGTT TGAGAAGCAG AAGGCGGAGG AAGACAATCA GGTTGATGAG
GAAATGCTGC GTATGAGAAA ACTGTTGAAG ACTTCATTGT CTGAACTGGA TCTTTCAGTA
CGCGCTTACA ACTGTTTGAA ATCTGCGGAT GTGAAAACTT TGGGTGACCT GGTAAGACTG
GAAATTTCTG ATATGATGAA ATTCCGGAAC TTCGGTAAAA AGTCACTCAC CGAGTTGGAA
CAACTCGTAG CCGACAAGCA GCTCACATTT GGAATGGACG TGTCGAAGTA CCGTCTGGAC
GAGGATTAA
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| Protein sequence | MPDKVVMEKA DDFHGLFEFK PLEKGYGVTI GNALRRILLS SLEGYAITSV KFPGVLHEFS
SIEGIVEDVT EIILNLKMVR FKKVSDLSES RIVVNLKNVS VITAGDIGKF TSAFEVLNPD
QVICHIDDQK EFEMELLLDK GRGYVPADEP RANELPFGYI AVDSIYTPIK NVKYSVENTR
VEQRTDYERL LIDIQTDGSI HPEDALKGAA NILIQHFMLF SDQTMTFEKQ KAEEDNQVDE
EMLRMRKLLK TSLSELDLSV RAYNCLKSAD VKTLGDLVRL EISDMMKFRN FGKKSLTELE
QLVADKQLTF GMDVSKYRLD ED
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