Gene Dfer_4367 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4367 
SymbolrpsM 
ID8227970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5281597 
End bp5281974 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content46% 
IMG OID644932214 
Product30S ribosomal protein S13 
Protein accessionYP_003088734 
Protein GI255038113 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0099] Ribosomal protein S13 
TIGRFAM ID[TIGR03631] 30S ribosomal protein S13 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.128251 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.316218 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGTA TTGCAGGAGT AGACATTCCA GATCGCAAAA GAGGCGAAAT CTCATTGACT 
TATATTTTCG GGATCGGCCG TAGCTCGGCT AAGAAAATCC TCGAAAAGGC AGGTGTTGAT
TTGAATAAAA AGGTGATCGA CTGGACCGAC GACGAGTCTG GTGCGATCCG TGGGGTTATT
GCTGGGGAAT ACAAAGTAGA AGGCGCTCTT AAGTCTGAAG TTCAGTTGAG CATTAAGCGT
CTTATGGATA TCGCTTGTTA TCGTGGCCTC CGTCACCGTA AAGGATTGCC TTTGCGTGGT
CAGAGAACGA AAAACAACTC ACGTACTCGT AAGGGTAAAC GCAAAACTAT CGCGAACAAG
AAAAAGGCTA CTAAATAA
 
Protein sequence
MARIAGVDIP DRKRGEISLT YIFGIGRSSA KKILEKAGVD LNKKVIDWTD DESGAIRGVI 
AGEYKVEGAL KSEVQLSIKR LMDIACYRGL RHRKGLPLRG QRTKNNSRTR KGKRKTIANK
KKATK