Gene Dfer_4364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4364 
Symbol 
ID8227967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5280406 
End bp5281203 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content49% 
IMG OID644932211 
Productmethionine aminopeptidase, type I 
Protein accessionYP_003088731 
Protein GI255038110 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0024] Methionine aminopeptidase 
TIGRFAM ID[TIGR00500] methionine aminopeptidase, type I 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0760334 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.344284 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTATC TTAAAACAGA AGAGGAAATC AACCTGATAA AGGTTAGTGC TCAACTGCTC 
GGCAAGGCAC ATGCGGAAGT CGCTACCTGG GTAAAACCGG GTGTTACAAC CGGAAAGTTG
GATGCGGTTG CTGAGGAATA TATCAGAGAT AACGGTGGAA TCCCTTCATT CAAGGGATTC
AACAAATTTC CGGCCTCTCT TTGTATATCG GTCAATGAAG TAGTAGTCCA CGGGATTCCC
GGGGGCTACG TGCTAAAAGA GGGGGACATC GTTTCCATCG ACTGCGGGGT TAAGCTGAAT
GGCTATCATA GTGACAGCGC GTACACTTAC CCGGTGGGAG AGGTTTCCAA AGAGGTGATG
AACCTCTTAA CCGCAACCAA AAAATCCCTG TACAAGGGAA TTGAGCAAGC GGTGGATGGC
CTTCGGATCG GCGATATCGG CCACGCGGTT CAGAGTTATG TTGAAGACCG TGGCTATACA
GTCGTGAGAG AGTTGGTAGG ACATGGAGTA GGCAGGGATC TGCACGAAGC TCCGGAAGTA
CCCAACTACG GTAAAAGAGG CAAAGGAATA CGATTGAGAG AAGGCATGGT TTTGGCTATC
GAGCCGATGA TCAACCTTGG AACGAAAGCA GTAGTGCAGG AGCGCGACGG CTGGACAATC
CGGACCAACG ACAGAAAGTA TTCCGCGCAT TTCGAACATA CCGTGGTAGT GAGAAAAGGA
AAGGCCGAAA TTCTGACCAC ATTCGATTAC ATTGAAAAAG TGACGGCCAA CACCAGCCTT
ATGGTTGAAG TACAGTAA
 
Protein sequence
MIYLKTEEEI NLIKVSAQLL GKAHAEVATW VKPGVTTGKL DAVAEEYIRD NGGIPSFKGF 
NKFPASLCIS VNEVVVHGIP GGYVLKEGDI VSIDCGVKLN GYHSDSAYTY PVGEVSKEVM
NLLTATKKSL YKGIEQAVDG LRIGDIGHAV QSYVEDRGYT VVRELVGHGV GRDLHEAPEV
PNYGKRGKGI RLREGMVLAI EPMINLGTKA VVQERDGWTI RTNDRKYSAH FEHTVVVRKG
KAEILTTFDY IEKVTANTSL MVEVQ