| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4338 |
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| Symbol | |
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| ID | 8227941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 5263272 |
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| End bp | 5265218 |
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| Gene Length | 1947 bp |
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| Protein Length | 648 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644932185 |
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| Product | OmpA/MotB domain protein |
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| Protein accession | YP_003088705 |
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| Protein GI | 255038084 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.553848 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGCTT ACAAGGATGG CCAGAAGAAA TTTGCAAACG GCGAATATGA TCTCGCGATC
AAGGGTTTCC AGAAAGCTGC CGAAGCCAAC ATCGAGCCCG TGCAGACGAG CTATCTCATC
GCGGAATCGT ACAGGCTATC CAACCGCTTC AAAGAAGCTA TCCCCTACTA CAAAAAAGCA
CTTGACGGCG GCATTACCAA TCCCGATGCC CGCTTCCAGT ATGCTTACGC ATTAAAAACA
ACCGGTGAAT ACGCCGACGC CTCCGCGCAG TTCTCTGAAT TTGCCAAAAC CCAGAATGCC
CCGCAAAACT TGCAGGAAAG GGCATTGCGC GAAGTCGAGA TCATCCGCAT TGCCGACCGT
TTGAAAGCCA ATAAAATGGA CGTAGAACTG AAAGACTTGC CATTGAACAC CGCCGGCTCC
GAGTTCGCTC CGACCGTGGT AGGCAATGAG CTGGTGTTTT CAGCTTCCAA AAAAGACAAG
ATTTATACCA ACAACGGCCA GCAAATGCTG GGGCTATATA AAATCAATAT CGCTTCCGAT
CCCGGCAATA CGCAGGGTAA CCCTGTTCTG TTCAGCCAGG AAGTATTTGA ACCGGAAGCC
CACGACGCTT CGCCCGCATT TTCGCCGGAT GGCAAAACAC TCGTGTTCGC CAGAAGTAAT
ACCGGCAAAA AGAAGGACAA ATCGCCCGAT GTGGACCTTT ACATGAGCCG TAACATCAAT
GGCCAGTGGT CGGCTCCCGC CCCGCTGCCG ATCAACGACT CCCTCGCCTG GGACGGCTCG
CCCGCATTCT CGCGTGACGG CAAAACACTC TATTTCGCAT CCAACCGCGC AGGCGGTGTG
GGCGGCATCG ACATTTACCG CACCAACATG GATGCCTCGG GCCGGTTTAG CCGCCCGGTA
AATATGGGCC GCGATATCAA CACGCCTGGC GACGACATGT TCCCTTACGT GGCAGAAGGC
GGAAAACTGT ACTTTGCATC GGATGGCCAC CCCGGCCTTG GAAAGCTCGA CCTTTTCTCT
GCCACCAGAA CACAGGGTGT AATCACGATC GAAAACCTGG GACTGCCGTT CAATAGTCCG
CAGGATGATT TCGGATTGGT ATTTTACCAA AACCTGAAAA AAGGCTTCTT CGCATCGAAC
CGCGATGGCG GCAAAGGTGA CGATGACATT TACTACTTCG CCGCACCGGA GGACGAGGAT
ACCACGACCG TCGCGAAACA CACCGACCCG AACGACCCGC TCAATCCGAA CAACCCGAAT
TATATCAACG GCAAGCCGAA AGTGGTGCGC TACTTCCTCG CCGGAACCGT GGTGGAAAAT
GGCGAAACCC CAAGCCCGAT CGATTCGGCG GTGGTGCGCA TTCTGCCCGA CACCTCGGAC
ACACAAATCG CCGAGTACCC AACGGCCAAA GACGGGAAAT TCGGCAAACA GTCGGTGGAA
GAAGGCAAAT CGTATCAATT GCTGGTACAG CGCAAAGGTT ACATCAGCAA GCGCGAGCCA
TTCTCAATGG CCGGTCGCAA CATCCCGCCG ATATTCCTGA CAAAAGAATT GACCGATACG
ACATTCAATG TGACGATCAA GCTCGACAAG CTGGAACTGA ACAAGACCTT CGTGCTGGAA
AATATCTATT ACGATCTGGA CAAATACAAT ATCCGCCCCG ATGCGGCCAT AGAGCTTGAC
AAACTGGTGC AGATCCTCAA AGACAACCCG ACGATGACCA TCGAGCTCAG CTCGCACACG
GATGCGCGCG CAACGGATGC CTATAACATG ACGCTCTCTC AAAACCGCGC CGAATCGGCG
GTGGCTTACC TCAACTCCAA AGGCATCGAG GCCGACCGAA TGGAAGCCAA GGGTTACGGT
GAAAGAGAGC TCATCATTCC AAACGCCAAA ACCGAGGAAG AACACCAGCG CAACCGCCGC
ACTGAATTCA CGATCCTGAG TTACTGA
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| Protein sequence | MQAYKDGQKK FANGEYDLAI KGFQKAAEAN IEPVQTSYLI AESYRLSNRF KEAIPYYKKA
LDGGITNPDA RFQYAYALKT TGEYADASAQ FSEFAKTQNA PQNLQERALR EVEIIRIADR
LKANKMDVEL KDLPLNTAGS EFAPTVVGNE LVFSASKKDK IYTNNGQQML GLYKINIASD
PGNTQGNPVL FSQEVFEPEA HDASPAFSPD GKTLVFARSN TGKKKDKSPD VDLYMSRNIN
GQWSAPAPLP INDSLAWDGS PAFSRDGKTL YFASNRAGGV GGIDIYRTNM DASGRFSRPV
NMGRDINTPG DDMFPYVAEG GKLYFASDGH PGLGKLDLFS ATRTQGVITI ENLGLPFNSP
QDDFGLVFYQ NLKKGFFASN RDGGKGDDDI YYFAAPEDED TTTVAKHTDP NDPLNPNNPN
YINGKPKVVR YFLAGTVVEN GETPSPIDSA VVRILPDTSD TQIAEYPTAK DGKFGKQSVE
EGKSYQLLVQ RKGYISKREP FSMAGRNIPP IFLTKELTDT TFNVTIKLDK LELNKTFVLE
NIYYDLDKYN IRPDAAIELD KLVQILKDNP TMTIELSSHT DARATDAYNM TLSQNRAESA
VAYLNSKGIE ADRMEAKGYG ERELIIPNAK TEEEHQRNRR TEFTILSY
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