Gene Dfer_4329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4329 
Symbol 
ID8227932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5252636 
End bp5253898 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content52% 
IMG OID644932176 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003088696 
Protein GI255038075 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0738] Fucose permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.699497 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAGAA ACATTTTCAT CGTAATCCTG ATCTTCCTGA TCTTTTTCGT CATCTCATTC 
CTGACCAACA TCCTCGGTCC GATTATCCCC GATATCGTCA AAAGTTTCGA TCTGAGCATT
GGTCTGGCTG GTTTCCTTCC GTTCGCATTC TTCGTCGCTT ACGGCGTGAT GTCGATCCCG
GCAGGCTTGA TGGTGGAGCG GTTTGGTGAA AAAGTGATGC TGATCGGTGC GTTTCTGTTA
GCATTCGGCG GCGCATTACT CTTCGCGTTG ATCCCGGGCT TTGCCATCGC ATTGTTCTCG
CTCTTTCTGA TTGGCATTGG AATGGCCATT TTACAGGTGG TGATCAACCC TTTGCTCCGG
GTTTCGGGCG GGGAAGAGAA ATTTGCATTT TACTCTGTGC TGGCGCAGCT TTTCTTCGGC
GCCGCGTCGT TTTTAAGCCC GCTGCTTTAC AGTTATTTGG TTTTAAATGT CCATTCACCA
AATGGCGATT CCGGTTTCCT GATCGGCACG CTCAATGGGC TGGTGCCGGA AAGCCTTAAA
TGGGTATCGC TATACTGGGT GTTTGCGGTG ATTGCGCTGG CGATGGCCGC CGTGATCGCG
ATGGTGAGAT TTCCCAAAGT GGAATTGCTG GAAGACGAGC GGATCGATGT CGGTAAGTCG
TTTGCCGAGT TGGCGAAAAA CCGGCTTGTT TGGCTCTTTT TTCTTGGCAT ATTCTGCTAC
GTGGGCACGG AGCAGGGCAT TGCCAACTGG ATCTCGCAAT TTCTCCAAAC TTACCACGGG
GTAGATCCGG CCACGACCGG CGCTTCGGTC ATATCCTATT TCTGGGGCTT GCTTACGATC
GGATGCTTCC TGGGACTGCT GCTATTGAAA ATCTTCGATA GCCGGAAAGT CCTCGTATTT
TTTACTTGCG GAGCCATTGT TTCACTGCTA ATGGCCTTGT TTGGGCCACG GGAAATGGCG
TTTATCAGCT TCCCGATGGC AGGCTTTTTC GCTTCCGTAA TGTATTCGGT GATATTCTCA
TTGGCGCTGA ATTCCGTTCC GCGGCACCAT GGCACCTTCT CGGGCATTCT TTGCGCGGGC
ATTGCCGGCG GCGCCGTAGT TCCGCTGATC GTCGGTGGGC TGGGGGAGCT GGTAGGGCTG
CGTTTCGCGA TGCTGTTCCT GCTCATTCCC CTCGGTTACA TTGCAAGCAT TGGTATTTGG
GCCAAGCCGC TTGTAAATAA TGAAACCGTT TCCAGTGTGA AGGAGCTGTT CAAAATGAGT
TAA
 
Protein sequence
MQRNIFIVIL IFLIFFVISF LTNILGPIIP DIVKSFDLSI GLAGFLPFAF FVAYGVMSIP 
AGLMVERFGE KVMLIGAFLL AFGGALLFAL IPGFAIALFS LFLIGIGMAI LQVVINPLLR
VSGGEEKFAF YSVLAQLFFG AASFLSPLLY SYLVLNVHSP NGDSGFLIGT LNGLVPESLK
WVSLYWVFAV IALAMAAVIA MVRFPKVELL EDERIDVGKS FAELAKNRLV WLFFLGIFCY
VGTEQGIANW ISQFLQTYHG VDPATTGASV ISYFWGLLTI GCFLGLLLLK IFDSRKVLVF
FTCGAIVSLL MALFGPREMA FISFPMAGFF ASVMYSVIFS LALNSVPRHH GTFSGILCAG
IAGGAVVPLI VGGLGELVGL RFAMLFLLIP LGYIASIGIW AKPLVNNETV SSVKELFKMS