| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4309 |
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| Symbol | |
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| ID | 8227912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 5222259 |
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| End bp | 5223641 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644932156 |
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| Product | hypothetical protein |
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| Protein accession | YP_003088676 |
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| Protein GI | 255038055 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0549386 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACTTG TTTCAATCCC GGTTTTAACA TTTTTAACAT TTCTTTGTAT GCTACGCACA
CAAACATCAC ATTGCCAAAA ACAGATCACG CATGACTTAA CCTACCACCA CGATCTCGAC
AACAACGATA ATTTTTCGCC AGACGGCAAA TGGCTTGTAT ACGACACAAG GACAGACGAC
GGAGGTATCG CAGAATCGGC GCGGATAGAA CGCGTAAATA TTGAAACAGG AGAGAAACAA
GTACTTTTTG ATATTCCAAA CAATGCAATT TGGGGTCCCG GAGCGGGAGC AGTGAGTTAC
CATCCAAAAG AAAATGCTGT GATATTTATT CATGGCCTCG CCAACTGTAC TAAGGAAAAT
CCCTACCAAC AATGGCGGCG CACAGGAGTG GCGGTTATTG ACTCTGAACC AAATGTCCCT
ATTTATATAG ATGCGCGTGA CGTAATTCCA CCGTACACCC AAGGTGCGCT ACGTGGGGGC
ACACATAGGC ACGAATGGAG TGGCGACGGC CAATGGATCG GATTTACCTA CAATGATGCC
GTCTTAAAAA AATTAGAAGA TTCTACTGGA CAAAAACGCA ATCTAAGAAC AATCGGAGTT
TCAAGAAATA TTGGTGCTAC TATTAATGTC AACAAAAATC AAGAAAGCGT TGCGGGAGAA
TGGTTTAGTG CAATTATTGT ACGAGTTGTA CCAAATCCGG TCGCAGGTAG CGACGAAATC
AGTCACGCAG CAAACGATAG CTGGGTCGGT TTATATGGTT ATTGGAATAA GGAAGAAGGA
CAACCAAAGA TAGCACGGGG ATTCTTGGGA ACGGTAAGAA ATAAATTAGG CCAAGATGTC
CCGGAAGTAT ATATAGTAGA CATTCCCGAT GATATTAGTA TGCCCGGCCC GCTAGGACCA
TTGGAGGGGA CCGCTACTGA CTTCCCAATG CCTCCAAAGG GCACCGTTCA GCGTCGGCTT
ACATTTACTG CCGAAACAAA ATATCCAGGT TGTGCAGGCA TTGTTCGCTC TTCGCCGGAT
GGTAGCCAGC TTGCCTTCTT AGCCAAAGAT GCCAAAGGTG TCAGTCAAAT ATTCACCATT
TCGCCCCTCG GAGGCAAGCC GCGGCAAGTG ACCGAATGCA CCTCCGACGT TACCGGCAAT
CTCCGCTGGC ATCCGGACGG GAAGCATGTC AGTTATGTTT ATGAAGGTAG CATTGTACTT
TGCGAGGTTG GCGACGGACC TTTTCGGGAA AGAATTCAGG TACTAACCGA GCCTTCGGAA
TTTGCTACCA GCAACCTGGT ATGGTCACCG GACGGGAAAG TGCTGGCGTT CAACCGGCTG
GTTAAAAATG ATACGGGTAA AGCGATGCAG CAGGTGTTTA TATTAAAATT GGAAGGAAAC
TAA
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| Protein sequence | MKLVSIPVLT FLTFLCMLRT QTSHCQKQIT HDLTYHHDLD NNDNFSPDGK WLVYDTRTDD
GGIAESARIE RVNIETGEKQ VLFDIPNNAI WGPGAGAVSY HPKENAVIFI HGLANCTKEN
PYQQWRRTGV AVIDSEPNVP IYIDARDVIP PYTQGALRGG THRHEWSGDG QWIGFTYNDA
VLKKLEDSTG QKRNLRTIGV SRNIGATINV NKNQESVAGE WFSAIIVRVV PNPVAGSDEI
SHAANDSWVG LYGYWNKEEG QPKIARGFLG TVRNKLGQDV PEVYIVDIPD DISMPGPLGP
LEGTATDFPM PPKGTVQRRL TFTAETKYPG CAGIVRSSPD GSQLAFLAKD AKGVSQIFTI
SPLGGKPRQV TECTSDVTGN LRWHPDGKHV SYVYEGSIVL CEVGDGPFRE RIQVLTEPSE
FATSNLVWSP DGKVLAFNRL VKNDTGKAMQ QVFILKLEGN
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