Gene Dfer_4260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4260 
Symbol 
ID8227863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5156764 
End bp5157282 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content58% 
IMG OID644932107 
Productthioesterase superfamily protein 
Protein accessionYP_003088627 
Protein GI255038006 
COG category[I] Lipid transport and metabolism 
COG ID[COG1607] Acyl-CoA hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.166669 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAAC CAAAAAAGCC CCATCAATCC GAAGTGACCA TGACCGAAAT GGTGCTTCCC 
AACGATACCA ACACCCTTAA TAACCTGATG GGAGGGCGGC TGCTGCACTG GATGGACATT
TGCGCGGCTA TTTCGGCACA AAAGCATTCC AACCGCATTG TGGTGACGGC CTCGGTGGAT
AATGTGTCGT TTACGGAGCC GATCCGCCTG GGTAACATCG TGACGATGCG CGCCAAGGTG
ACGCGTGCGT TCAATTCCTC GATGGAGGTG TTCCTGGAAG TGTGGGCGGA GGACATCCCG
GCAGGCGTGC GGGTGAGTAC CAACCGCGCA TTCTACACAT TCGTGGCGGT GGACCAGAAC
GGCCGGCCCA TTGAAGTGCC GCCGCTGGAA CCGGAAACCG ACGAGGAGAA CGAGTTGTAC
CTGAGTGCCC TTCGCCGCCG CCAGCTGCGC CTCGTGCTGG CCGGCCGCCT GAATGCTTCC
GAAGCCACCG AATTGAAAGC GCTTTTTAAG GTAGAATAA
 
Protein sequence
MLKPKKPHQS EVTMTEMVLP NDTNTLNNLM GGRLLHWMDI CAAISAQKHS NRIVVTASVD 
NVSFTEPIRL GNIVTMRAKV TRAFNSSMEV FLEVWAEDIP AGVRVSTNRA FYTFVAVDQN
GRPIEVPPLE PETDEENELY LSALRRRQLR LVLAGRLNAS EATELKALFK VE