| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4187 |
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| Symbol | |
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| ID | 8227788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 5063788 |
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| End bp | 5065512 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644932033 |
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| Product | hypothetical protein |
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| Protein accession | YP_003088555 |
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| Protein GI | 255037934 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1462] Uncharacterized protein involved in formation of curli polymers |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGAT TTTACCGAAC CCTAACTGGA CTCCACCAGT CGATAATTCT TTGCGCCTTC
ACTGTGGCGC TGCAAATCAT CACACATGAA TCCCTGGCTC AGAAAAAAAG CAAAGAGCCC
GAGATAACCA TCGAGGACGT CAAACAAAAA TGCCAGAATC TGCCGCGTGC CCAGCGGGTC
ATCATCAAGG TGGCGCGGTT CAGTGTTTCC ACCAAAGCTG CCCAGGCCAG ATCTACTTTT
GGTGACGAAC TTGCTACCAT GCTTACATCT GCATTGCAGC AAACGAATTG TTTTCGGGTG
ATGGAAACAA ACAAGAATTT ATCAGACGCC ACTTCTGAGA TGGCCTTTGC GCAGGATGGG
TTCACCAACG GTTCCGGGCC GCAGGCAGGA CAGATGCTCG GAGCGCAACT GATCGTGACG
GGTGAGATCA CCGATTTCAG TGAGGGCAGC TCTTCCAAAT CTATTTTGGG GGTAGAAAGT
AAAAGCAACC AGGCGACGGT GGGCTTCAAC CTCAAAGTAC TGAACCCGCA GACGGGCGAA
TTGCTGTTTT CCAAAGATGT AAACATGAAA GGGCATAATT CGGGAAAGGT GCTGGACATT
TTTGGCGTGA AAACTTCGAG CAGCAACGAA AACCGCGCGG TACAGGACGC ATTACAGAAG
GCGATCATCA AAGCGGTTGA AATCCTGGCC GACGAAAAAG ACAACATCGA CATTCCTGAG
CCCCAGAAGC CCAAGGAAAT CAAACGCTAT ACCGCGCAAA ATTGCAATAT GTTGCGATCC
GGATCGCCGA AGGTGATTAT TCTGGTTACG GAGGCTACGA CGCAGGGAAC GACACGTCTG
AATCAGGAGG ATGATTTTGA GCGCCGTCAG CAAGATCTGT ACGTAGAACG CGAGCAGGCG
ATCACAAAAG CCATCGGAAA TCTTTTTACC GGCAAGAACC GCAAAGGGCG GCAGGAAGAA
CCCAAGCCCG AAACAACGAC CCAAACAGCC GCTACGGCGC AGATTAAGAA GGTTGTGATT
GAACAAACCG CTACGGAAAC GGAGCTCACC CGGCTTTTTG TCGAGTCGGG ATTTAAGGTG
GTTGACCCCA AAATTTATGG TCAAATGAAG CAGCTGTCGG ATTCGACCGG CGATCTTGGC
CAGATGGCGG CGTTGGGCTT GAAAATGGGC GCGCAGATTA TCGTAACCGG TCAGGCCATT
TCGGAAAAGA CGAATGGACA GGGTGGGATG ACGGCCTGTC GTGCCAGGTT GGAAATAAGG
GTGATTGCGA CGGAGGACGG ATCGATTTTG GCCACGAATA CGGTTTCGGC TGGCGGGATA
GATGTGTCCG AAGCAGTTGC AAATAAAGTC GCGCTGCGGA ATGCGTCGGA GAGCATGTCG
CAATACCTGA TGGAGCGGCT GTGCGGGATG AACCTGCAAT TCAGCAATAT GGGCTCGGCC
ACTAAAACGG CCAATGCGCA GGTCAGGCAG GCGGCACCTG GCGCACTCAC GGAAGTATCG
GTTTCGAATG TGAGTTTCGC AAAACTTCAA GTCATTGCTA CAAGCCTCGG TAAAAATCCC
AAAGTTAAAA GCGTTAAAAA ATCCATCAAA GGAGCGGAAG GTACGTTGCT GATCGAGCAT
TCGGGCAGTA CGGACGAGCT GATTGAAAAC CTCAGTAAAA TTCCCGCATT GAAATTCGAA
GTGTCGGAGC TGGAAGAAGG GAAGGCAAGG ATTGCGGTGC AGTGA
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| Protein sequence | MKRFYRTLTG LHQSIILCAF TVALQIITHE SLAQKKSKEP EITIEDVKQK CQNLPRAQRV
IIKVARFSVS TKAAQARSTF GDELATMLTS ALQQTNCFRV METNKNLSDA TSEMAFAQDG
FTNGSGPQAG QMLGAQLIVT GEITDFSEGS SSKSILGVES KSNQATVGFN LKVLNPQTGE
LLFSKDVNMK GHNSGKVLDI FGVKTSSSNE NRAVQDALQK AIIKAVEILA DEKDNIDIPE
PQKPKEIKRY TAQNCNMLRS GSPKVIILVT EATTQGTTRL NQEDDFERRQ QDLYVEREQA
ITKAIGNLFT GKNRKGRQEE PKPETTTQTA ATAQIKKVVI EQTATETELT RLFVESGFKV
VDPKIYGQMK QLSDSTGDLG QMAALGLKMG AQIIVTGQAI SEKTNGQGGM TACRARLEIR
VIATEDGSIL ATNTVSAGGI DVSEAVANKV ALRNASESMS QYLMERLCGM NLQFSNMGSA
TKTANAQVRQ AAPGALTEVS VSNVSFAKLQ VIATSLGKNP KVKSVKKSIK GAEGTLLIEH
SGSTDELIEN LSKIPALKFE VSELEEGKAR IAVQ
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