| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4180 |
|---|
| Symbol | |
|---|
| ID | 8227778 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 5047121 |
|---|
| End bp | 5048287 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644932023 |
|---|
| Product | Phosphoribosylformylglycinamidine cyclo-ligase |
|---|
| Protein accession | YP_003088548 |
|---|
| Protein GI | 255037927 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0150] Phosphoribosylaminoimidazole (AIR) synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0231005 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACTA CCGACCGTTA TCTCCAGCGC GGTGTATCGG CATCGAAGGA AGATGTGCAT
AAGGCCATCG AAAAGATCGA TAAAGGGCTT TTCCCAAAGG CTTTTTGTAA AATAGTCCCG
GATACGCTCG CGGGCGATCC CGACTACTGC ACGATCATGC ATGCAGACGG CGCAGGTACC
AAAACTTCCC TGGCGTATTT GTACTGGAAA GAAACTGGTG ACATTTCGGT GTGGAAAGGC
ATCGCGCAGG ACGCGATTGT CATGAATACC GATGACCTGC TCTGCGTAGG CGCCACCGGA
CCGATGCTCT ATTCGTCTAC CATCGACCGT AACAAAAACC GCATTCCCGG TGAAGTGATT
GCCGAGGTGA TCAACGGTGC CGAAGAAGTG CTCGAAATGC TCCGCAGCTA CGGCGTCGAG
ATTTACAGCA CAGGCGGCGA AACGGCCGAT GTGGGCGACC TCGTCCGCAC CGTGACCGTC
AACAGCACGG TAATCGCCCG GATGAAACGC TCGGAAGTGG TGGATAATGC CAATATTCAG
GCAGGTGATG TGATCGTGGG GCTGGCTTCC TACGGGCAGG CGACTTATGA AAGCGAATAC
AACGGCGGAA TGGGCAGCAA TGGCCTCACC TCCGCCCGAC ACGATATTTT GGGTAAATAC
CTTTCCAAAT ATACCGAAAG TTTCGATCCG GAAGTAAGCG ACGACCTCAT TTACAGCGGC
AGCAAAAACC TCACCGATCC GGTGGAGGAC GCGCCGTTGA ATGTAGGCAA GCTGATCCTC
TCGCCTACGC GCACCTACGC GCCCGTGGCC AAGGCCCTGC TCGACGAGAT GCGGCCTGAA
ATTCATGGCA TGGTACATTG CAGTGGCGGA GCACAGACAA AAATTCTACA TTTTGTTGAT
AACCTTCACA TTATCAAAGA CAACCTGCTG CCGGTACCGC CGCTGTTCAG GCTGATCCAG
GAGGAAAGCG GAACGAGCTG GCAGGAAATG TACAAGGTGT TCAATATGGG CCACAGGCTG
GAAATTTACC TTCCCGAAGC GCACGCCGCC CGTGTGATCG AAATCTCTCA GTCGTTTGGG
ATCGATGCCC AAGTGGTAGG CCGCGTGGAG GCAGCCGCAG AGAAAAAACT TACCATCAGC
AGCGAATACG GCACTTTTTA TTATTGA
|
|---|
| Protein sequence | MKTTDRYLQR GVSASKEDVH KAIEKIDKGL FPKAFCKIVP DTLAGDPDYC TIMHADGAGT
KTSLAYLYWK ETGDISVWKG IAQDAIVMNT DDLLCVGATG PMLYSSTIDR NKNRIPGEVI
AEVINGAEEV LEMLRSYGVE IYSTGGETAD VGDLVRTVTV NSTVIARMKR SEVVDNANIQ
AGDVIVGLAS YGQATYESEY NGGMGSNGLT SARHDILGKY LSKYTESFDP EVSDDLIYSG
SKNLTDPVED APLNVGKLIL SPTRTYAPVA KALLDEMRPE IHGMVHCSGG AQTKILHFVD
NLHIIKDNLL PVPPLFRLIQ EESGTSWQEM YKVFNMGHRL EIYLPEAHAA RVIEISQSFG
IDAQVVGRVE AAAEKKLTIS SEYGTFYY
|
|---|
| |