| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4173 |
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| Symbol | |
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| ID | 8227771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 5034667 |
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| End bp | 5036832 |
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| Gene Length | 2166 bp |
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| Protein Length | 721 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644932016 |
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| Product | cytochrome c biogenesis protein transmembrane region |
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| Protein accession | YP_003088541 |
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| Protein GI | 255037920 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4232] Thiol:disulfide interchange protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000359793 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCG GTATTTTATT CATTCTCAGC ATTGTCCTCT TCGTCGCCGG CGTTGTGCAG
GCGCAGATTC AGAAACCGAA GGCACGCTGG ACATATTCTT TTTCCAAACC GGAAGTTAAA
AAAGGCGAGA CCGTCGACCT GGTTTTTACC GCAACCATCG ACAAGGACTG GTACATGTAT
TCCTCCGATT TCGACCCGGA CCTGGGCCCG GTGCTGACGA CATTTACCTT CGAAAAAAAC
AACACCTTTG AAGTAGTAGG CAAGCTGAAG CCACAAAGCC CGAAGACCAA ATTTGAGGAA
GTATGGGGTG GAAATGTACG TTATTTTGAA GGAAAAGGGG TTTTTAAACA AACCGTAAAG
ATCCTGGCCG ACAATCCGGT GATCAAAGGT GCTTCCGAAT TCCAGACCTG CAGTCACGTA
ACGGGGCTTT GCATTGCCGG TGGTGAAGAT TTCGAATTCA AGGGACTGAA AGTAGCCGCC
GCCGGAGGGT CACAGCCTCA TGTAGGCGCT GCGACACCCG CAAACACGCA ATCAGGCGCT
GCATCAGCGA CCGAAACAGC CAAATCCGCA GCCACCACGT CATCGGGCGT AGCCACACCG
GCATCGGCCT CCGCAGCAAC TAACGACACT GCCATATCCA TTTCCGCATC GGACAATCCC
GCAGCCGCCG ATAGTGCCAG CGCAGCAACT ACTGCTCCAA CCGCCTCCAC CGAAGTTACC
GCGGCCACCG ACACGCCAGC CGACGGTTCG CTCTTAGGCT TTGCATTGGC TGCATTCCTG
TCGGGTTTGG TGGCATTGCT TACCCCCTGC GTTTTCCCGA TCATCCCGAT GACCGTCAGC
TTTTTCACCA ACCAGGAAAA GGGCAAGTTC AAGGCATTAT TATATGGTAT TTCAATTATT
CTCATCTATA CATTAATAGG TACCGTCGTG TCGCGGCTGA ATGGGCCGGC ATTTGCAAAC
TTCCTCAGCA CGCACTGGCT GCCTAACCTG CTGTTTTTCG CCATTTTCAT CACGTTCGGG
CTCTCGTTTC TGGGACTGTT CGAGATCGTG CTGCCGAGTG GGTTTGTGAA TAAAATGGAT
CAAAAAGCAG ATCAGGGAGG TTACGCAGGC GTGTTCTTCA TGGCATTTAC ATTGGTGCTG
GTATCATTCT CCTGCACCGG GCCCATCGTC GGCAGCTTGC TGGTGGCTTC GGCGGGCGGA
GAAGTCGTGA AACCGATCGT GGGTATGGCG GCATTTTCGG CGGCATTTGC CATTCCATTC
ACCTCGTTCG CATTGTTTCC GCAATGGCTG AAATCGCTGC CCAAATCCGG CGGCTGGCTA
AATGCGGTAA AGGTTGTTTT GGGCTTCCTG GAACTGGCAT TGGCATTGAA ATTTTTCAGC
ATCGCCGACC AGGTTTACCA CTGGAATTTG TTGGATCGTG AGATTTACCT GGCGTTCTGG
ATCGTCATTT TCGCGTTGCT AGGCTTTTAT TTGTTAGGTA AAATCCGCAC GCCGCACGAT
TCACCCATTG AAAAAGTGAG CGTCCCGCGC CTGCTGCTCG CTATTGTGAC ATTCACATTT
GTGGTATACA TGATCCCCGG CATGTTCGGT GCGCCATTGA AAGCCCTGGC CGGTTACCTG
CCGCCGCAAT CGACATTGGA TTTTGATCTG AGCAAAAGAA GTGCTGCCGC AACTACGCCT
TCTGCATTAG CAGGGGAATC TCGCAAGTAC GCCGACCTCT TCCATCTCCC CCACGAACTC
GAAGGTTTCT ACGATTACCA GGAAGCATTG GCCTACGCCA AAAAAGTGAA CAAGCCCGTT
TTCATCGACT TCACCGGCCA CGGCTGCGTA AACTGCCGCG AAATGGAAGC CCGCGTGTGG
GTAGATCCGG CGGTGTTGCA GCGGCTGAAC AACGATTATG TGATCGTGGC GCTCTATGTG
GACGACAAAA CCGAGCTCCC CGAATCGCAA TGGTACACCT CGAAATACGA TAACAAGGTG
AAGAAAACCA TCGGCGCCCA GAATGCGGAT TTGCAGATTG TGAAATACAA CAACAACGCC
CAGCCGCATT ACTGCCTCGT GGATCATGAG GGGAATCTGC TGGTTTCGCC TAAAAACTAC
GATCTGGACC CTGCGAAGTT CGCAGCGTTT TTGGATAGCG GGAAGGCGGC TTTTGGGAAG
AAGTAG
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| Protein sequence | MKRGILFILS IVLFVAGVVQ AQIQKPKARW TYSFSKPEVK KGETVDLVFT ATIDKDWYMY
SSDFDPDLGP VLTTFTFEKN NTFEVVGKLK PQSPKTKFEE VWGGNVRYFE GKGVFKQTVK
ILADNPVIKG ASEFQTCSHV TGLCIAGGED FEFKGLKVAA AGGSQPHVGA ATPANTQSGA
ASATETAKSA ATTSSGVATP ASASAATNDT AISISASDNP AAADSASAAT TAPTASTEVT
AATDTPADGS LLGFALAAFL SGLVALLTPC VFPIIPMTVS FFTNQEKGKF KALLYGISII
LIYTLIGTVV SRLNGPAFAN FLSTHWLPNL LFFAIFITFG LSFLGLFEIV LPSGFVNKMD
QKADQGGYAG VFFMAFTLVL VSFSCTGPIV GSLLVASAGG EVVKPIVGMA AFSAAFAIPF
TSFALFPQWL KSLPKSGGWL NAVKVVLGFL ELALALKFFS IADQVYHWNL LDREIYLAFW
IVIFALLGFY LLGKIRTPHD SPIEKVSVPR LLLAIVTFTF VVYMIPGMFG APLKALAGYL
PPQSTLDFDL SKRSAAATTP SALAGESRKY ADLFHLPHEL EGFYDYQEAL AYAKKVNKPV
FIDFTGHGCV NCREMEARVW VDPAVLQRLN NDYVIVALYV DDKTELPESQ WYTSKYDNKV
KKTIGAQNAD LQIVKYNNNA QPHYCLVDHE GNLLVSPKNY DLDPAKFAAF LDSGKAAFGK
K
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