Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_4133 |
Symbol | |
ID | 8227731 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 4992193 |
End bp | 4994037 |
Gene Length | 1845 bp |
Protein Length | 614 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644931976 |
Product | ABC transporter related |
Protein accession | YP_003088501 |
Protein GI | 255037880 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.293166 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAAAG AAGAAAATGG GAAAGGGCTG TCCGGCAAAG ATTTGCCCCG GAACGACTTG CAATCGCCAT TCGCAGTAAG AAAAATCAAA TGGGAAGGAC TGAAAATCAC GCTTCATCTG CTGCGTTACC TCAGGCCGTA CCGCATGACA TTTGCCGCGG GAATGCTGTT CCTTGCATTA TCGACCGGCA CCTCGCTCGC ATTTCCGAAG CTCGTGGGCA GCATTATCGA GGTAATCGAA GGCAAATCGC AGTTTTCGAT TAATCAGATC ACCCTGCTTT TGTTTGTGGT CCTACTCGGG CAGGCGGTGT TTTCATATTT CCGGATCTAC CTGTTTTCCC AGGTGAGCGA AAGGGCGGTG AACAATATCC GGCTGGATGT TTTCAGTAAG ATTATCACAT TACCTGTTCC ATATCTCGAA GAGCGGCGCG TGGGCGAGCT TACGAGCCGC ATCACTTCCG ATGTTTCGCA ATTGCAGGGC CTGCTGTCAT TCACACTGGC CGAGTTATTC CGGCAGGCGG CGACATTGAT CGTCGGTATG TCCATTTTGT TTTATACTTC CTGGAAACTC ACGCTCTTCA TGCTCGCCAC GGTGCCGGTG CTTGGCGTTG CTTCGGTTTT TTTCGGCCGT CACACGCGCA GGCTCTCCCG CAAGGCGCAG GATCAGCTCG CAGCGGCGAA TGTGGTGGTG GAAGAAACCT TGCAATCGGT GCATGTGGTG AAGGCATTTA CCAATGAGCC GCTCGAAATC CATCGCTACC GCACCATCCT GGACCGTGTG GTGAACCTTA TGCTGTTTGC CGCCCGCTTT CGGGGCGGGT TCGCTTCGTT TATCATTTTT GCGATGTTCG GCGGCATTGT GGGCGTGATC TGGTATGGCG CGGCGCTGGT GCAGGCGGGA GAATTCGGGC TTTCTGACTT GTTCACATTT ATTCTCTACA CCACTTTTAT CGGCGCGTCG ATTAGCGGAA TGGGCGATTT GTATGCGCAA ATCAACCGGA CGGTAGGTGC CTCGGAGCGG ATTTTTGAAA TTTTGGGTGA AACGGCTGAG GTCTCGGTCG AAGCTGCCAG GAATGCCGTC GCGGGCGATA TCGAAGGCCG GGTTACCTAT CAGGACGTGC ATTTCGCCTA CCCATCGCGC GCGGACCTGC CCGTGTTGAA AGGCGTGTCG CTGGACATCC GGGCGGGAGA GAAAATCGCT TTGGTGGGAT ACAGCGGCGC GGGTAAATCG ACCATCGTGC AGCTTCTGAT GCGTTTTTAC AATTATCAAT CGGGCGAAAT CCTGGTGGAC GGCAAGCCGG TGCGGGATTA TGGTATTTCG GAACTACGCA AAAACATCGC CATCGTGCCG CAGGAAGTGA TGCTGTTCGG CGGGACGATT TATGAAAATA TCGCTTACGG AAAGCCGTCG GCCTCACGCG AGGCCATTAT CGACGCTGCC CGCCGTGCGC ATGCCCTGGA ATTCATCGAA TCGTTTCCCG AAGGTTTCGA AACCATCGTC GGCGAACGGG GAATCAAGCT CTCCGGAGGC CAGCGGCAGC GCATTGCCAT CGCGCGGGCC ATTTTGAAAG ATCCCAAAAT CCTTATCCTC GACGAAGCCA CGAGCTCGCT CGACGCCGAG TCGGAGAAGC TGGTACAGAT CGCGCTGGAC GAATTAATGC AAAACCGGAC CACGATCGTG ATCGCACACC GGCTCGCCAC CATTCGCAAG GTGGACATGA TTTACGTGCT GCGCGACGGC CGCATTGCCG AGTCGGGCAC GCACCAGGCA TTGAGCACGA TCCCCGACGG CGTGTATGCC AATCTTATCA AACTACAATT TGAAACAGCC ATTGAAAAAT ACTGA
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Protein sequence | MAKEENGKGL SGKDLPRNDL QSPFAVRKIK WEGLKITLHL LRYLRPYRMT FAAGMLFLAL STGTSLAFPK LVGSIIEVIE GKSQFSINQI TLLLFVVLLG QAVFSYFRIY LFSQVSERAV NNIRLDVFSK IITLPVPYLE ERRVGELTSR ITSDVSQLQG LLSFTLAELF RQAATLIVGM SILFYTSWKL TLFMLATVPV LGVASVFFGR HTRRLSRKAQ DQLAAANVVV EETLQSVHVV KAFTNEPLEI HRYRTILDRV VNLMLFAARF RGGFASFIIF AMFGGIVGVI WYGAALVQAG EFGLSDLFTF ILYTTFIGAS ISGMGDLYAQ INRTVGASER IFEILGETAE VSVEAARNAV AGDIEGRVTY QDVHFAYPSR ADLPVLKGVS LDIRAGEKIA LVGYSGAGKS TIVQLLMRFY NYQSGEILVD GKPVRDYGIS ELRKNIAIVP QEVMLFGGTI YENIAYGKPS ASREAIIDAA RRAHALEFIE SFPEGFETIV GERGIKLSGG QRQRIAIARA ILKDPKILIL DEATSSLDAE SEKLVQIALD ELMQNRTTIV IAHRLATIRK VDMIYVLRDG RIAESGTHQA LSTIPDGVYA NLIKLQFETA IEKY
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