Gene Dfer_4088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4088 
Symbol 
ID8227686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4934319 
End bp4934693 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content48% 
IMG OID644931931 
ProductNADH-ubiquinone/plastoquinone oxidoreductase chain 3 
Protein accessionYP_003088456 
Protein GI255037835 
COG category[C] Energy production and conversion 
COG ID[COG0838] NADH:ubiquinone oxidoreductase subunit 3 (chain A) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.350445 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACG AATATCTCCC TTCGGATTAT TTGCCCATTA TTGTGCAATT TCTGCTCGCT 
GCCGGCTTCA TCGGCGGCAC GATGATCGTC ACTCACCTGA TCGGCCCGAG CCGCAGAAGC
AAAAAGAAAG ACGATCCCTT CGAATGTGGT ATCGAATCGG TTGGTGATGC CCGGACGCCC
ATTTCTGTGA AGTACTTCCT GGTAGCGATC CTGTTCGTAT TGTTCGACGT CGAAGTGATC
TTCATGTATC CCTGGGCTGT GAATTTCAAA GGCCTGGGAA TGTTCGGGTT TATAGAAATG
TTGTTGTTCA TGGCACTTCT TTTGTCTGGT TTCTATTACG TGATTCGCAA GGGCGTACTG
AACTGGGAAG AATAG
 
Protein sequence
MKNEYLPSDY LPIIVQFLLA AGFIGGTMIV THLIGPSRRS KKKDDPFECG IESVGDARTP 
ISVKYFLVAI LFVLFDVEVI FMYPWAVNFK GLGMFGFIEM LLFMALLLSG FYYVIRKGVL
NWEE