Gene Dfer_4086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4086 
Symbol 
ID8227684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4933242 
End bp4933742 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content50% 
IMG OID644931929 
ProductNADH dehydrogenase (ubiquinone) 30 kDa subunit 
Protein accessionYP_003088454 
Protein GI255037833 
COG category[C] Energy production and conversion 
COG ID[COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit 
TIGRFAM ID[TIGR01961] NADH (or F420H2) dehydrogenase, subunit C 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.335829 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTACGA ACCAGGAGGT AGCCGAAGGG CTTTTGGAAA AATTCGGCGA TCAGGTTTTC 
GACTTCGAGG AGCCGTACGG TTTGTTGACA CTCTCGACAA CCCGCGAAGA GATTATTCCA
TTGATGGAGT TCCTGAAAGA CCACAAACAT TACCAGGTAA TATTCCTGAC CGACATTACG
GGCGTTCAAT ATCCCGACAA TGCAGGCAAG GAATACGTGG TGGTCTACCA TATGCACAGC
TTTGTGCACA ACTTCCGCAT CCGCATTAAA GTGGCACTTT CCGCCGCAGA TATCCACATT
CCGACGGCAA CAGGCCTGTT TGCCAGCGCC AACTGGATGG AGCGGGAAAC GTACGATTTT
TTTGGTATCT TGTTTGACGG GCACCCCAAC CTGAGGCGCA TTCTGAACAT CGAGGAAATG
GATTATTTCC CGATGCGCAA AGAATACCCG ATGGAGGACG CTACCCGCGA AGATAAAATT
GACGCCCTTT TCGGCCGATG A
 
Protein sequence
MLTNQEVAEG LLEKFGDQVF DFEEPYGLLT LSTTREEIIP LMEFLKDHKH YQVIFLTDIT 
GVQYPDNAGK EYVVVYHMHS FVHNFRIRIK VALSAADIHI PTATGLFASA NWMERETYDF
FGILFDGHPN LRRILNIEEM DYFPMRKEYP MEDATREDKI DALFGR