| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4066 |
|---|
| Symbol | |
|---|
| ID | 8227664 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 4913330 |
|---|
| End bp | 4914673 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644931909 |
|---|
| Product | oxidoreductase domain protein |
|---|
| Protein accession | YP_003088434 |
|---|
| Protein GI | 255037813 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000000027865 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.000000464548 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGAACAAA ACAGACGTAA TTTTTTGAAA GCATCGGGCC TCATCGCCGG CGGTGCTATA
TTGAATCCGT TTACGGGCTA CGGCTATAAC AGCGCCGTGG GCGAGACGAT CAAGGTGGCC
CTCATCGGCT GCGGCGGTCG CGGAACGGGT GCAGCCGCGC AAGCGCTGAG CACTTCGCAA
AATGTGCAGA TCGTGGCCAT GGCCGACGCT TTCAAGGACC GTCTCGATGA TTCTTACAAA
AACCTGACAG CTAAAAAATA TAAAAATGCT GCTGGACAGC CGGTTGACAT CAAAACGAAA
GTGGATGTAC CCGAAGACCG GAAGTTTGTA GGATTCGACG CATTCAAAAA AGCCATTGCA
TTGAAGGACG TGGATGTGGT GATCCTGGCA ACGCCTCCGG GCTTCCGTCC ATCGCATTTC
GAAGAGGCTG TGAAAAACAA CAAGCATATT TTTATGGAAA AACCGGTTGC AACCGATGCA
CCAGGTATCC GCAAAGTGCT TGAAGTAGCC GAAGAAGCGA AAAAGAAAAA ATTGAACGTG
GTTGTGGGTC TGCAACGCCA CTACCAGGCC AACTACCGCG AGGCGATCAA ACGCATTCAC
GACGGCGCAC TGGGCGATAT CGTAGGCGGC CAGGTGTATT GGGTCGGCAG CAGCCCTTGG
ATGAAAGAAC GCCAGGCTAA CCAGACCGAA ATGGAATACC AAATGAGAAA CTGGTATTAT
TTCAACTGGC TTTGCGGCGA TCACATTTCA GAGCAGCACG TTCACAATAT CGACGTAGCC
AACTGGGTGA AAAACGGTTA CCCTGTATCG ATCCAAGGCT CAGGCGGCCG CCAGGTACGG
ACCGGCAAAG CATACGGTGA AATTTACGAT CACCACACGC TCGACCTCGT TTACGCGGAC
GGAACGGTGA TTTCCAGCCA ATGCCGCCAG TTCGAAGGAA CCTGGAACCG TGTTGACGAA
GCATTCGTGG GTACCAAAGG CCGCATCGAC AGCTTTGACG ACAAAAGAAC GATTCTTAAA
GACTACAAAG GAGGCCTGAT TTATCAACAC GATAATAAGG GCGACAAAAA CCCATATCAG
GTAGAGCACG ACGAGCTGTT TGCTGCCATC GCGAAAGGCC AATACAAATT TGCCGACGCT
GAAAATGGCG CAAAAAGCAC TATGACGGCC ATTATGGGCC GTATGGCAAC CTACTCGGGC
AAGCAAATCA AATGGGACGA GGCATTGAAC TCGGATATTA ACCTGTTCCC GGATAAACTG
GCATGGGATG CATCTCCGAA AATCCTGCCG GGTCCCGACG GTCTTTATCC GGTTGCAATC
CCGGGCAAAA CCCAGGTAAT CTGA
|
|---|
| Protein sequence | MEQNRRNFLK ASGLIAGGAI LNPFTGYGYN SAVGETIKVA LIGCGGRGTG AAAQALSTSQ
NVQIVAMADA FKDRLDDSYK NLTAKKYKNA AGQPVDIKTK VDVPEDRKFV GFDAFKKAIA
LKDVDVVILA TPPGFRPSHF EEAVKNNKHI FMEKPVATDA PGIRKVLEVA EEAKKKKLNV
VVGLQRHYQA NYREAIKRIH DGALGDIVGG QVYWVGSSPW MKERQANQTE MEYQMRNWYY
FNWLCGDHIS EQHVHNIDVA NWVKNGYPVS IQGSGGRQVR TGKAYGEIYD HHTLDLVYAD
GTVISSQCRQ FEGTWNRVDE AFVGTKGRID SFDDKRTILK DYKGGLIYQH DNKGDKNPYQ
VEHDELFAAI AKGQYKFADA ENGAKSTMTA IMGRMATYSG KQIKWDEALN SDINLFPDKL
AWDASPKILP GPDGLYPVAI PGKTQVI
|
|---|
| |