Gene Dfer_4057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4057 
Symbol 
ID8227655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4905679 
End bp4906260 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content47% 
IMG OID644931900 
ProductBiopolymer transport protein ExbD/TolR 
Protein accessionYP_003088425 
Protein GI255037804 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.000796256 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000255237 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAGCAA TAGAAGAATC CGGTGGTGGT GGGCACGGTA AAGGTGATGG TAAGGTCCGG 
GGTAAGAAAA TGTCCACCCG TGTGGACATG ACTCCGATGG TGGACCTGGG ATTTTTGCTT
ATTACTTTTT TCATGCTTGC GACAACAATG TCTAAACCGA CATCCATGTC GCTCGCGGTG
CCTGACAAAA CCGAAGATCA GGAAAAACCG ACCGAACCTT TGAAAGCATC GAAAGTATTG
ACCCTGTTTA TGGGCGATAA CGACGATGTG TATTATCTGG ACGGTATCGC TGCTGATGAT
GATAAAGCGA AAACTGAACT GAAAACGACC CGCTACGGGC ACGATCTCAG AACCGTGATC
TTCGCGTCTC AAAAGCGTAT CAATGCAGCT AATCCAAAGG ACAAAGACGG TAATGAAGCG
TTTGTGGTGG TAATTAAGCC TACGGAAGTA TCTACCTATA AAAACATGGT AGACGTGCTG
GATGAAATGG CGATCACCAA GACCAAACGT TATGCACTCG TGGACAACCT GACCGACTCG
GAGAAGGAAG TTCTCGGTGA CAAAATCAAA CCTAAAAATT AG
 
Protein sequence
MAAIEESGGG GHGKGDGKVR GKKMSTRVDM TPMVDLGFLL ITFFMLATTM SKPTSMSLAV 
PDKTEDQEKP TEPLKASKVL TLFMGDNDDV YYLDGIAADD DKAKTELKTT RYGHDLRTVI
FASQKRINAA NPKDKDGNEA FVVVIKPTEV STYKNMVDVL DEMAITKTKR YALVDNLTDS
EKEVLGDKIK PKN