Gene Dfer_4038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4038 
Symbol 
ID8227636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4890571 
End bp4891092 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content53% 
IMG OID644931881 
ProductNADH-ubiquinone/plastoquinone oxidoreductase chain 6 
Protein accessionYP_003088406 
Protein GI255037785 
COG category[C] Energy production and conversion 
COG ID[COG0839] NADH:ubiquinone oxidoreductase subunit 6 (chain J) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00110439 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAAGCGA TTATTTTTTA CATCTTCTCT GCGCTGACCC TCCTGGCCGG GCTTTTTATC 
CTTGTGTCGA GAAACCTGAT CTACGGCGCA TTCGCATTGT TCCTGGCATT TCTGGGCGTA
GCCGCGTTGT ATGTGCTCGC AGGAGCGGAT TTCCTCGCCG TTTCGCAGAT CATGATCTAC
GTCGGCGGCA TTCTGGTGCT TCTCATATTT GGGATCATGC TTACCCAAAA ACGGGAGAAA
AGTGATGATT CCACCCGGCA CAACCGCGTT GATGTGCCGA TTACCCGGAG AATCTGGGGT
GTCCTGGCCG GTGTCGGTTT CTTCGGGCTG CTCGTAAAAG TGATCCTATC CTCGGATTTT
GCCATGGCCG GGGCAGAAAT GAGCACCAAA TCGACGATCA GGACGATCGG TGTGGAGTTG
ATGACCAGCC ATTTGCTGCC GTTCGAAGTG GCGGCAATAT TGCTTCTCGT TGCGCTGATC
GGCGCCGCTT ATCTTGCATT AAACCGAAAT CCAGCGCCAT GA
 
Protein sequence
MEAIIFYIFS ALTLLAGLFI LVSRNLIYGA FALFLAFLGV AALYVLAGAD FLAVSQIMIY 
VGGILVLLIF GIMLTQKREK SDDSTRHNRV DVPITRRIWG VLAGVGFFGL LVKVILSSDF
AMAGAEMSTK STIRTIGVEL MTSHLLPFEV AAILLLVALI GAAYLALNRN PAP