| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3988 |
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| Symbol | |
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| ID | 8227584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 4837440 |
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| End bp | 4838315 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644931830 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003088357 |
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| Protein GI | 255037736 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00119398 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.630817 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCGC ATTTTCATAA GGTCCCGATT CCCTCAAGGA CGTCGTTCAG CATACGCCAT
GACAAAGACT CCGGCTTTGG CACGGTTTGG CATTACCATC CCGAGCTGGA ACTGCATTAT
CTGGTCAAAG GCAAGGGGGT GCGGTTTGTC GGGGACAATA TCAGTAACTT TTCGGACGGC
GAGCTGATAC TGCTCGGCGA GAACTTGCCA CACACCTGGC TTGTGGAAGA AGGCGCCAGC
AATACCGCGG TGGAGGCGAT CATCATTCAC TTCCTGCCCA ACTGCCTGGG GAGCGAGCTG
CTGCTGCTGC CGGAGGCGTA TCAGATCCCG AAATTGTACG AGAGGGCCAA AAGAGGCCTG
TTGATCACCG GCGAAGCGAA GGAAAAGGTG ATCCGCCTGA TGCATTCGGC GGTAAATGCC
GAAAATCTTG ACCGGCTCAT CGCCTTGCTA TCCATCCTGA AAATTCTTGC GGAAGCAAGT
GAATACGAAA CGATCGCTTC GGCGCACGCA TTCTACAAAT CCAACGACGC CGAAACACTT
CGGTTAAATA AAATTTACGC TTACACGCTT TCCAACTACC GCAACGACAT TTCATTGCAG
GATGTAGCGT CGATCGCCAA CCTGGGCATT ACTTCTTTTT GCAGGTATTT TAAGTTGATG
ACCAAGAAAA CATATAATGA TTTCCTTGTC GAGATTCGGA TCAGCCAGGC GTGCCGGTTT
CTGATCGAGG ACAAAATGGC GACTGAAGTG ATTTGTTTCG AGTGCGGCTT CAACAATGTT
TCCAACTTTT ACCGGCATTT CAAGAAGGTT ACCGACATGA CGCCATTGGA ATACAAGCGG
AAATACCTTT ACAAAGCCGC ACCCGAAATG GTTTGA
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| Protein sequence | MKPHFHKVPI PSRTSFSIRH DKDSGFGTVW HYHPELELHY LVKGKGVRFV GDNISNFSDG
ELILLGENLP HTWLVEEGAS NTAVEAIIIH FLPNCLGSEL LLLPEAYQIP KLYERAKRGL
LITGEAKEKV IRLMHSAVNA ENLDRLIALL SILKILAEAS EYETIASAHA FYKSNDAETL
RLNKIYAYTL SNYRNDISLQ DVASIANLGI TSFCRYFKLM TKKTYNDFLV EIRISQACRF
LIEDKMATEV ICFECGFNNV SNFYRHFKKV TDMTPLEYKR KYLYKAAPEM V
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