Gene Dfer_3966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3966 
Symbol 
ID8227562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4813336 
End bp4814214 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content56% 
IMG OID644931808 
Productmalonyl CoA-acyl carrier protein transacylase 
Protein accessionYP_003088335 
Protein GI255037714 
COG category[I] Lipid transport and metabolism 
COG ID[COG0331] (acyl-carrier-protein) S-malonyltransferase 
TIGRFAM ID[TIGR00128] malonyl CoA-acyl carrier protein transacylase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.147046 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.712508 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACGG CATATGTTTT CCCTGGTCAG GGCTCGCAGT TCAAAGGAAT GGGTCTGGAC 
CTCTACCAGA GCTCCGATTC CGCCAAGGCA TTGTTTGAAA AAGCCAACGA AATCCTCGGC
TTCAACATCA CCAAAATCAT GTTCGAAGGC ACCGATGAGG AGCTGAAACA AACCAATGTG
ACGCAGCCCG CAATTTTCAT TCATTCCGTG ATCCTCGCGA AAATCAATCC CGATTTCGCT
CCGAACATGG TGGCAGGCCA TTCGCTCGGT GAATTTTCGG CGCTGGTAGC CGCAGGTTCG
CTTTCATTCG AAGACGGCCT TTCGCTGGTG GCGAAGCGTG CTGCCGCTAT GCAAAAAGCC
TGCGAAATCC GCCCGTCGAC CATGGCTGCC ATCCTCGGCC TGCCCGATGC GGTGATCGAA
GAAGTTTGCG CGGGTATTAC CGACGAGATC GTAGTGCCGG CAAACTACAA CTGTCCGGGC
CAGGTGGTGA TTTCCGGCAC GATCGAAGGT GTGGAACGCG CCAACGAACT GCTGAAAGCC
GCCGGGGCTA AACGTGCGCT GGTGTTGCCG GTGGGCGGTG CATTCCACTC GCCATTGATG
GAGCCGGCAC GCGAAGAGCT GGCAGCGGCC ATCCATGCGG CGCAGTTCGA GCCGCCGATC
TGCCCCGTTT ATCAGAATGT GAATGCAAAG CCGGCCACCG AAGTAGCCGT GATCCGGGAA
AACCTGATCT CGCAGCTCAC CGCTCCGGTA AGGTGGACGC AGTCCGTGGA GCAAATGGTA
GCCGACGGCG CGGAAATCTT CATCGAATCG GGACCGGGCA AAGTTTTGCA AGGCCTTGTA
AAAAAGATCG CTAGCACGGT GGACGTAAAA AGTATTTAA
 
Protein sequence
MKTAYVFPGQ GSQFKGMGLD LYQSSDSAKA LFEKANEILG FNITKIMFEG TDEELKQTNV 
TQPAIFIHSV ILAKINPDFA PNMVAGHSLG EFSALVAAGS LSFEDGLSLV AKRAAAMQKA
CEIRPSTMAA ILGLPDAVIE EVCAGITDEI VVPANYNCPG QVVISGTIEG VERANELLKA
AGAKRALVLP VGGAFHSPLM EPAREELAAA IHAAQFEPPI CPVYQNVNAK PATEVAVIRE
NLISQLTAPV RWTQSVEQMV ADGAEIFIES GPGKVLQGLV KKIASTVDVK SI