Gene Dfer_3959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3959 
Symbol 
ID8227554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4806693 
End bp4807403 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content49% 
IMG OID644931800 
Productglycosyl transferase family 2 
Protein accessionYP_003088328 
Protein GI255037707 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.568122 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTAT CGGTTATCGT TCCTGCCTAC AATGAAGAAA AGACAATCCG AAATGTGCTG 
GATAAACTCA AATCCGTTGA CCTGATAGGC AATTTTCAAA AGGAGATCGT AATTGTGAAC
GACTGTTCCG CCGACAACAC GGAAGCGGTT GCTAAAAGAT TTATAGAAGA GAATCCCGAG
CTGGAAGTGG CTTACTTCCG GCATGAATAC AACCAGGGAA AAGGGGCGGC ATTGCACACA
GGCATCCGCA GGGCCACGGG CGACTACATT ATCGTTCAGG ACGCCGACCT TGAATATGAT
CCCCAGGAAT TCAATATATT GCTAAAACCG GTTATCGAAG GATATGCGGA TGTGGTGTAT
GGCTCCCGCT TTATGGGCGG AAGACCGCAC CGCATCCTTT TTTTCTGGCA CACCATCGGG
AACAAGTTCC TGACGTTCCT GAGCAACATG TTCACCAACC TCAATCTGAC GGACATGGAA
ACATGCTACA AGCTCTTCCG CGCCGATCAG CTCAAAAGCC TCACGCTGCT CGAAAAACGT
TTCGGTTTCG AGCCGGAAGT GACGGCTAAA ATCTCCAAAA TCCCGAAAAT ACGCATTTAC
GAAGTGGGCG TGTCGTACTA TGGCCGCACG TATGAGGAGG GTAAAAAAAT CAACTGGAAA
GACGGCTTCC GCGCACTCTA CTGCATTGTG CGCTACGGAT TAGGAAGCTA G
 
Protein sequence
MKLSVIVPAY NEEKTIRNVL DKLKSVDLIG NFQKEIVIVN DCSADNTEAV AKRFIEENPE 
LEVAYFRHEY NQGKGAALHT GIRRATGDYI IVQDADLEYD PQEFNILLKP VIEGYADVVY
GSRFMGGRPH RILFFWHTIG NKFLTFLSNM FTNLNLTDME TCYKLFRADQ LKSLTLLEKR
FGFEPEVTAK ISKIPKIRIY EVGVSYYGRT YEEGKKINWK DGFRALYCIV RYGLGS