Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_3959 |
Symbol | |
ID | 8227554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 4806693 |
End bp | 4807403 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644931800 |
Product | glycosyl transferase family 2 |
Protein accession | YP_003088328 |
Protein GI | 255037707 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.568122 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTAT CGGTTATCGT TCCTGCCTAC AATGAAGAAA AGACAATCCG AAATGTGCTG GATAAACTCA AATCCGTTGA CCTGATAGGC AATTTTCAAA AGGAGATCGT AATTGTGAAC GACTGTTCCG CCGACAACAC GGAAGCGGTT GCTAAAAGAT TTATAGAAGA GAATCCCGAG CTGGAAGTGG CTTACTTCCG GCATGAATAC AACCAGGGAA AAGGGGCGGC ATTGCACACA GGCATCCGCA GGGCCACGGG CGACTACATT ATCGTTCAGG ACGCCGACCT TGAATATGAT CCCCAGGAAT TCAATATATT GCTAAAACCG GTTATCGAAG GATATGCGGA TGTGGTGTAT GGCTCCCGCT TTATGGGCGG AAGACCGCAC CGCATCCTTT TTTTCTGGCA CACCATCGGG AACAAGTTCC TGACGTTCCT GAGCAACATG TTCACCAACC TCAATCTGAC GGACATGGAA ACATGCTACA AGCTCTTCCG CGCCGATCAG CTCAAAAGCC TCACGCTGCT CGAAAAACGT TTCGGTTTCG AGCCGGAAGT GACGGCTAAA ATCTCCAAAA TCCCGAAAAT ACGCATTTAC GAAGTGGGCG TGTCGTACTA TGGCCGCACG TATGAGGAGG GTAAAAAAAT CAACTGGAAA GACGGCTTCC GCGCACTCTA CTGCATTGTG CGCTACGGAT TAGGAAGCTA G
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Protein sequence | MKLSVIVPAY NEEKTIRNVL DKLKSVDLIG NFQKEIVIVN DCSADNTEAV AKRFIEENPE LEVAYFRHEY NQGKGAALHT GIRRATGDYI IVQDADLEYD PQEFNILLKP VIEGYADVVY GSRFMGGRPH RILFFWHTIG NKFLTFLSNM FTNLNLTDME TCYKLFRADQ LKSLTLLEKR FGFEPEVTAK ISKIPKIRIY EVGVSYYGRT YEEGKKINWK DGFRALYCIV RYGLGS
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