Gene Dfer_3952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3952 
Symbol 
ID8227547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4799135 
End bp4799743 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content50% 
IMG OID644931793 
ProductGTP-binding protein HSR1-related 
Protein accessionYP_003088321 
Protein GI255037700 
COG category[R] General function prediction only 
COG ID[COG0218] Predicted GTPase 
TIGRFAM ID[TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTTC AGGAAGCCAG ATACGTGATG AGTAACTCCG ATTACCAGAA ATGCCCGGAG 
CCCGTCCTTC CCGAATATGC ATTCATCGGC CGTTCCAATG TGGGTAAATC GTCGCTGATT
AACATGCTGA CTAGCAAAAA AGCCCTGGCA AAAACGTCGC AGCAGCCTGG AAAAACGCAG
ATGATCAACC ATTTCATCAT CGATGACGCG TGGTACCTCG TCGATTTGCC TGGCTACGGC
TATGCCAAAG TAAGCAAGGT TGAGCGCGAA AAATGGGAAA AAATGATCCA CGATTACCTG
CATTACCGCG AAAACCTTAT TTGCACGTTC GTGCTGGTGG ACGTCCGCCA CAGCGCCATG
GCCGTCGACC TGAACTTTAT GGCCGCTCTT GGCGAAGCGG GCATTCCGTT TGAAATTATT
TTTACCAAAG CCGACAAACT CAAACCGGCC CAGGTAGCCA GCCAGGTGGA GGCTTACAAG
CGTAAAATGG CGGAACTTTG GGAAGAAGTG CCCGAAATGT ACGTAACGTC GGCGGAGAAA
AATGAAGGCC GCGAGCCCAT TCTGACGGCA ATAGAAACTT ATAATCAGTC GTTTGTGAAG
ACAAAATAG
 
Protein sequence
MKVQEARYVM SNSDYQKCPE PVLPEYAFIG RSNVGKSSLI NMLTSKKALA KTSQQPGKTQ 
MINHFIIDDA WYLVDLPGYG YAKVSKVERE KWEKMIHDYL HYRENLICTF VLVDVRHSAM
AVDLNFMAAL GEAGIPFEII FTKADKLKPA QVASQVEAYK RKMAELWEEV PEMYVTSAEK
NEGREPILTA IETYNQSFVK TK