Gene Dfer_3942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3942 
Symbol 
ID8227537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4790194 
End bp4791069 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content57% 
IMG OID644931783 
Productdiacylglycerol kinase catalytic region 
Protein accessionYP_003088311 
Protein GI255037690 
COG category[I] Lipid transport and metabolism
[R] General function prediction only 
COG ID[COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase 
TIGRFAM ID[TIGR00147] lipid kinase, YegS/Rv2252/BmrU family 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCATC CGTATCTTTT TATATTAAAT CCCAATTCGG GCACGTCGAT CGGCAAAAAC 
AGCGGGACCG TGCGTGAGCG GATCGAGGAA GTGGCCGGAA AAAACGGGTC GTCGGCAGAG
ATCCTCTTCA CGGAAGAGCC TGCACACGCC ACCGAGCTCG TACGCAAGCA CATGCATGCG
GAGAAATGGA AGGCGATTGT GGCCGTTGGA GGCGATGGAA CGGTGAATGA GATCGCCAAA
CCCCTCGTAG GCAGCGGCAT TCCGATCGGC ATTCTGCCGC TTGGCTCGGG AAACGGCCTG
GCCAGGCACC TCGGCCTCCC ACTCCTGCTC GACGCGGCGC TGAAACGGCT TTTCGAAGGC
AAACCGACCA CGATCGACAG CGCCGAACTC AACGGCATTC CTTTCTTCTG CACAGCCGGA
ATGGGTTTTG ACGCTTACGT GGGGCATTTG TTCAGTCAGC AGAAAGCACG GGGACTTGCC
ACTTACGTGA ATGTGTCGTT CAAAGCGTAT TGGTCGTACA AACCGCAGGC ATTCCGCCTC
AACGGCGTGG AGAAGCGGGC GTTTTCGCTG TCATTTGCCA ATGCGGGCCA GTTTGGGAAT
AATGCGTGGG TAGCGCCGCA GGCCAGCTTG CAGGATGGGC TGCTCGATAT TTGCACTATC
AGCCCATTTC CGCAGTGGTA CGGCACCGCG CTGGCGTACG GGCTGTTTAC GAAGCAGTTG
AAACAGTCGA CTTACATCGA CTACCAGCGC GCCGTGCAGG CGGTGGTGGA AACCGATACG
CCGCCGATGA TCCATTACGA CGGCGAGCCG CTGCAACTGG ACACGACGAA AATAGAAGTC
AGCATCAAGC CCGGAAGCAT CCAGGTGATC ATTTAG
 
Protein sequence
MTHPYLFILN PNSGTSIGKN SGTVRERIEE VAGKNGSSAE ILFTEEPAHA TELVRKHMHA 
EKWKAIVAVG GDGTVNEIAK PLVGSGIPIG ILPLGSGNGL ARHLGLPLLL DAALKRLFEG
KPTTIDSAEL NGIPFFCTAG MGFDAYVGHL FSQQKARGLA TYVNVSFKAY WSYKPQAFRL
NGVEKRAFSL SFANAGQFGN NAWVAPQASL QDGLLDICTI SPFPQWYGTA LAYGLFTKQL
KQSTYIDYQR AVQAVVETDT PPMIHYDGEP LQLDTTKIEV SIKPGSIQVI I