Gene Dfer_3926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3926 
Symbol 
ID8227521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4774922 
End bp4775857 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content57% 
IMG OID644931767 
ProductPpx/GppA phosphatase 
Protein accessionYP_003088295 
Protein GI255037674 
COG category[F] Nucleotide transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0248] Exopolyphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCGA GACTGGGAAT AATTGATTTA GGCACCAACA CTTTTCACCT CCTGATCGCG 
GAGCCCAACG GCGCTCATTT CAAGACGGTT TTCCACGAAA GCAGGCCGGC GCGCATCGGC
CTCGGCGGCA TCAACAAGCG CATTATCACA CCCGAAGCAC AGGACCGCGC GCTCGCCGTC
CTCTCCTATT TCCGCGAAAA GCTCGACTCC TTTGAAGTAA TGCCCGAGAA AACTTTCGCA
TTCGGCACCA GCGCGGTGCG CAATGCGGAA AACCGGCAGG CATTCTGCTC CGAAATCCTC
GAAAAAACGA ATATCGAAGT GACGGTCATC GACGGCAACC GCGAGGCCGA ATACATTTAC
AAGGGCGTCC GACACGGCGC CGACATTGGC GACGGCCCCT CGCTCATCAT GGACATCGGC
GGCGGGAGCG TCGAATTCAT TATCGGCAAC CGCTCGCAGA TTTTCTGGAA GCAGAGTTTC
GAGATCGGCG GGCAGCGGCT CATGGAGAAA TTCATGCGCA ACGACCCGCT CTCGCAGGCC
GACCGCCGGA GCCTCTACAA TCATTTCGAC GAAAACCTCA TCCCTCTCGC AAATGCGGTG
CACCAATATG CGCCCGAAAA GCTCGTGGGC TCCTCGGGCA CGTTCGACAC GCTGGTGGAC
ATCCATTTTC ACCACCACGC CGGCGCCTGG CCCCCGGCAG AGCAAACGGA TTTCGACATT
CCCCTGGAAG AATTTTACCG TGCGTATGCG CTCATCCTCT CGGGCAACCA TGACGAGCGC
ATGGCCATTC CCGGCATGAT CGAACTCCGC GTGGACATGA TCGTCGTGGC CGTTTGCCTG
ATAGACTACG TGCTCAAAAC GCATGGTATC CGGCAGATCC AGGTATCCAA GTATGCCCTC
AAAGAAGGCG TCCTGGCCGA ACTGATGGCC AAATAG
 
Protein sequence
MSSRLGIIDL GTNTFHLLIA EPNGAHFKTV FHESRPARIG LGGINKRIIT PEAQDRALAV 
LSYFREKLDS FEVMPEKTFA FGTSAVRNAE NRQAFCSEIL EKTNIEVTVI DGNREAEYIY
KGVRHGADIG DGPSLIMDIG GGSVEFIIGN RSQIFWKQSF EIGGQRLMEK FMRNDPLSQA
DRRSLYNHFD ENLIPLANAV HQYAPEKLVG SSGTFDTLVD IHFHHHAGAW PPAEQTDFDI
PLEEFYRAYA LILSGNHDER MAIPGMIELR VDMIVVAVCL IDYVLKTHGI RQIQVSKYAL
KEGVLAELMA K