| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3918 |
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| Symbol | |
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| ID | 8227513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 4762066 |
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| End bp | 4763592 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644931759 |
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| Product | protease Do |
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| Protein accession | YP_003088287 |
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| Protein GI | 255037666 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAA ATTGGAAAGG TTTGGTGTTG GTTGGGTTGA TTTCAAGCGC GTCAACCATA
GCTGGCCTCA AAATTCTGGC TCCCGATAAT GATAAGGATG TAATTTTTAA AGAAGCCGGT
TCCGAACCCC TTGCCCGTTT TACCTCGGCC GGCGCTCCTG CCGGTGCTCC CGGTGACTTT
GTGTATGCAG CCGAAGCGAC TACGCCCACG GTGGTTCACA TTAAGTCCAC AAGCACAAGA
CAGTCGTCAC GCGGCCAGCA GCAGATCCCG GATATTTTCC GCGACTTTTT CGGCGATGAC
TTCGGCAGCC CGCGCGGCCC GCAGCAGTCG GAAGCAACCG GTTCCGGTGT GATTATTTCT
AACGACGGCT ACATTGTGAC CAACAACCAC GTGGTGGAAG GCGCGCAGGA ACTGGAAGTG
ACGCTGCATA ACAAAAGCAA ATTCAGAGCG AAAATCATTG GCACCGACCC TTCTACCGAC
ATTGCGGTAA TCAAAATCGA AAGTAAGGAC TTGCCGGCCG TTACGCTGGG TAATTCCGAT
GCCGTGAAAG TAGGGGAGTG GGTGGTTGCC GTGGGTAACC CTTTCAACCT CGAATCTACC
GTTACAGCCG GTATCGTAAG TGCGAAAGGC CGCGGGTTGG GCATTATCGG CCAGTCGCGC
CGCAACCAGA TGCAGCCAAC GTCATCCGCT CCCGGTGATT CTCCGCTGGA ATCGTTTATC
CAGACCGACG CCGTGGTGAA CCCCGGTAAT AGTGGTGGTG CATTGGTGAA CCTCAAAGGC
GAGCTGATCG GTATCAACAC TGCTATCGCA AGCCCCACCG GCAGTTTCGC AGGTTACGCA
TTCGCTGTGC CATCGAGCAT TGTGAAGAAA GTATCTAGCG ATTTGATCAA ATTCGGTAAT
GTGCAGCGTG GTTACCTGGG TATTTCCCTC GACGATCTCG ACAGCCGTAA AGCAGAAGAA
TACGGTGTGA AAGTGAACGA CGGCGTTTAC GTTCGTGATT TCACCGAAAA TAGCGCCGCA
AAAGCAGGTG GAGTAGCCAA AGGCGACGTG ATCGTGAAAG TGGACGGTAT GAATATCCAC
TCTATTCCTG AATTGCAGCA ATCCATCGGT TTGCACAAAC CTGGCGATAA GGTGAATGTG
ACCGTCAACC GCGATGGCAA GGAAAAAGAC CTCAGCATCA CATTGCGTAA CCGCACAGGT
GGTTCTGAAA TCATCAAACG CGACGAATCC GCTGCGGTAA TGAGCTCGCT GGGCGCGCAA
TTCGGTAACC TGAGCGACCA GGAAAAGCAA CGACTATCGC GCTATAAAAT CGACGGTGGT
GTGAAAGTAC TCTCGATCAA CGGTGGCAAG TTTGCCCGCT CGCAGGTGGA AGAAGGTTTC
ATCATTACCA AAGTGAATGG CAAGGCTGTT AAAACCGTGA AAGAGTTCGA AGCGGCGATT
GCCGGCAAAG AAGAGTCGAT GGTGCAGTTT GAAGGACTTT ATCCTGATGC GCCTTACGAT
GTGTACTCGT TCGGATTCAG ATTGTAA
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| Protein sequence | MKTNWKGLVL VGLISSASTI AGLKILAPDN DKDVIFKEAG SEPLARFTSA GAPAGAPGDF
VYAAEATTPT VVHIKSTSTR QSSRGQQQIP DIFRDFFGDD FGSPRGPQQS EATGSGVIIS
NDGYIVTNNH VVEGAQELEV TLHNKSKFRA KIIGTDPSTD IAVIKIESKD LPAVTLGNSD
AVKVGEWVVA VGNPFNLEST VTAGIVSAKG RGLGIIGQSR RNQMQPTSSA PGDSPLESFI
QTDAVVNPGN SGGALVNLKG ELIGINTAIA SPTGSFAGYA FAVPSSIVKK VSSDLIKFGN
VQRGYLGISL DDLDSRKAEE YGVKVNDGVY VRDFTENSAA KAGGVAKGDV IVKVDGMNIH
SIPELQQSIG LHKPGDKVNV TVNRDGKEKD LSITLRNRTG GSEIIKRDES AAVMSSLGAQ
FGNLSDQEKQ RLSRYKIDGG VKVLSINGGK FARSQVEEGF IITKVNGKAV KTVKEFEAAI
AGKEESMVQF EGLYPDAPYD VYSFGFRL
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