| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3895 |
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| Symbol | |
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| ID | 8227490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 4738145 |
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| End bp | 4739290 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644931736 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_003088264 |
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| Protein GI | 255037643 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACCA GACCGCACAC CTGCACATTC AGGCCGGAAG ACCTCCTCGG CCGCTCCCCC
ATCGTACTCG ACCGTGATAA TATCATCCGG GAAATCAAAG GCCGCTCCGT CCTCATCACC
GGCGCCGCCG GGACGATCGG CAGCGAACTT GCCGCGCAGG TCTGCGCATG TGCGCCCGCA
AGGCTGGTGC TCGTGGATCA GGCAGAAAGC CCATTGCACG ACCTCGACCT TTTACTGACT
GAACAATATC CTCAAACCGA CATTAACACC TGCATCGGCA GCATTACCGA TGCGCTGCGG
ATGTCTGACA TTTTCGCGCA TTCGAAGGTC GACACCGTGC TGCACGCCGC TGCCTACAAG
CATGTCCCAC TGATGGAGCG ACATCCTTAC GAGGTGATCA AAACGAATGT TTTCGGTACC
AAAATACTGG CTGACCTGGC AGTATCGCAT GGCGTGGGCA AGTTTGTTTA CATTTCAACC
GACAAAGCCA TCAAGCCCGC CAGCGTGATG GGTGCCACCA AACGCTTTGC CGAAATATAC
CTTCAAAACC TGGCTAACAG ATTTCCCGAC CGGACGCGGT TCATCATCAC ACGTTTTGGA
AATGTACTGG GCTCCAATGG CTCGTTTCTG CTCCGTTTTG CACAACAAAT CCGCGAAGGC
GGACCGATCA CCGTCACACA TCCGCACGCC GAGCGGTACA TGATGACCGT CACCGAAGCC
TGCCAGCTCG TGCTGGCAGC CGCAGCGATC AGTAACGGCC ACGAAATTCT CTCCTTCGAC
ATGGGTGAGC CTGTGCGCGT AGCCGACATG GCCAAACGGA TGATCGAGCT TGCGGGCTTA
GGGCCGGGGA CGGATATCCA AATCCGCTTT ACCGGCTTGC GACCGGGTGA AAAGTTATCG
GAAGAGCCGC CTTCCGGCCC GGCCTGCGCG AGGGGGAAAA TCCAAAGCAC CGCCTTCTCC
GGCGACGCCG CCTCGTGGAT GCAGCAATGG CTGCCCGCAT TGCAGAATGC GCTCACATCC
TGCGAGCCCG AACGAATGGT AAGCATTCTC AAATCGGCAA TCCCCGAGTA CATCAGCGCC
AATTCGCCAT TTGCACGGCT TGATGTGCTG CGCCAAGCAT CCGAGGCCGT GGCACCGGCC
GTTTGA
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| Protein sequence | MQTRPHTCTF RPEDLLGRSP IVLDRDNIIR EIKGRSVLIT GAAGTIGSEL AAQVCACAPA
RLVLVDQAES PLHDLDLLLT EQYPQTDINT CIGSITDALR MSDIFAHSKV DTVLHAAAYK
HVPLMERHPY EVIKTNVFGT KILADLAVSH GVGKFVYIST DKAIKPASVM GATKRFAEIY
LQNLANRFPD RTRFIITRFG NVLGSNGSFL LRFAQQIREG GPITVTHPHA ERYMMTVTEA
CQLVLAAAAI SNGHEILSFD MGEPVRVADM AKRMIELAGL GPGTDIQIRF TGLRPGEKLS
EEPPSGPACA RGKIQSTAFS GDAASWMQQW LPALQNALTS CEPERMVSIL KSAIPEYISA
NSPFARLDVL RQASEAVAPA V
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