| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3886 |
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| Symbol | |
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| ID | 8227481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 4728890 |
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| End bp | 4729987 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644931727 |
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| Product | DNA replication and repair protein RecF |
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| Protein accession | YP_003088255 |
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| Protein GI | 255037634 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
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| TIGRFAM ID | [TIGR00611] recF protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.127784 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGCTAG AAAAGCTCCG TCTTACATAC TTTAAAAGCT ATGAGGAGAA GGCCTTTGTT
TTTGGAGAAC ATGTGAACTG TATTGTGGGC GAGAACGGCA GCGGCAAGAC CAACCTGCTC
GACGCGATCT ATTTTCTGAC CCTTACCAAA AGCGCATTCC ATAACCAGGA CGCGCTGGGC
ATCCGCCATA TCAACGATTT TTTCCTGCTT GACGGCGTTT TCAACGAACA CGGTAAGCAC
ATTCAGATCA CATGCAGCCT ACAACGCGGC CAGCGCAAGG TGTTTATGGC CGATAAAAAG
CATTATGACC GCCTCAGCGA CCATATCGGC CTTTTTCCTG TTGTCCTCAT TGCCCCGGAC
GATACCGATC TCATCCGCGA GGGCAGCGAA GAACGCCGCC GCTTTTTCGA CGGCGTGCTG
GGCCAGGCCG TGCCCGGTTA CCTGACCGAT TTTTTGCAGT ACAACAAGAT ATTAACCCAG
CGAAACGGCC TTCTCAAATT TTTCGCCGAA CGCAATCACC TCGACGAAGA CCTGCTCGAA
ACGTACAACG AGCCCCTGAT TGTCCTTTCG CAGCGCATTC ACCAGCACCG GGCGGCATTC
ATGGAAAAAT TCGTCCCGCT ATTCTATAAA TTTTACGAAT TCCTCAGCAG CGGTCACGAA
AAAGTGGACG TGATCTACGA AAGCGAAGTC GTCAGCCCGG ACTTCCCCGC CGAATTCCGC
CGCAACCGCA GCCGCGACCT CCACGCGCAA CGCACAGGCA AAGGCATTCA CAAGGATGAG
TACGTTTTCG AAATAGACGG GGTTACGCTT AAAAAATTCG GCTCACAAGG CCAGCAAAAG
TCCTTTCTGA TCGCCCTGAA ACTCGCGCAA TTCGAACTAT TAAAAGAAGA AAAAGGCAAA
ACGCCCATCC TACTGCTGGA CGATATCTTC GACAAGCTTG ACGACCGGCG CATTCACAAA
CTGATCGAGC TGATTGATAC GGGATTTTTA GCGCAGGTTT TCATCACCGA TGCCCGGCCG
GAGCGCTCGC AGCGGATTTT GGAGCATGTG AAGGCGGATG TAAGGTTTTT TGAGATTGAG
AAGGTGTTGA AAGGATAG
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| Protein sequence | MWLEKLRLTY FKSYEEKAFV FGEHVNCIVG ENGSGKTNLL DAIYFLTLTK SAFHNQDALG
IRHINDFFLL DGVFNEHGKH IQITCSLQRG QRKVFMADKK HYDRLSDHIG LFPVVLIAPD
DTDLIREGSE ERRRFFDGVL GQAVPGYLTD FLQYNKILTQ RNGLLKFFAE RNHLDEDLLE
TYNEPLIVLS QRIHQHRAAF MEKFVPLFYK FYEFLSSGHE KVDVIYESEV VSPDFPAEFR
RNRSRDLHAQ RTGKGIHKDE YVFEIDGVTL KKFGSQGQQK SFLIALKLAQ FELLKEEKGK
TPILLLDDIF DKLDDRRIHK LIELIDTGFL AQVFITDARP ERSQRILEHV KADVRFFEIE
KVLKG
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