Gene Dfer_3873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3873 
Symbol 
ID8227468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4710812 
End bp4711255 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content55% 
IMG OID644931714 
ProductNUDIX hydrolase 
Protein accessionYP_003088242 
Protein GI255037621 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.666215 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTCC GTCCATCCGC TATCCTTCTC GACAACGACA AAATCCTCAC CCTGCGCTAC 
CAGTATGGCG AAAAGGAAGT ATTCGCACTT CCCGGCGGAA ATCCCGACCC GGGCGAGTCG
CTTTCCGATG CATTGGCACG GGAGCTGATG GAAGAACTCG GCGTGGAAGT AGCAGTGGGG
AAAATGGTGT CCTGCGGCGA GGTAATCTGG CAGGAATTGC AGAAAGAAAC GCTGCACATG
ATATTTAATG CAAATATCAC AAAGGGCATC CCCGCGCTCG ACCCGGCGCA TACTACCGCG
CTGGAAATCG TATGGTTACC CATTTCGGAA CTACCGTCCA GGCATTTGTA TCCCAATGTC
GGCCCGCAGA TCGCCGCATT CTGCATGGAT TCTCTGCATT CGGGGCACAT CGGCGTGATC
GACCAGCCTT ATCTGCGCTC CTAA
 
Protein sequence
MNVRPSAILL DNDKILTLRY QYGEKEVFAL PGGNPDPGES LSDALARELM EELGVEVAVG 
KMVSCGEVIW QELQKETLHM IFNANITKGI PALDPAHTTA LEIVWLPISE LPSRHLYPNV
GPQIAAFCMD SLHSGHIGVI DQPYLRS