| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3850 |
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| Symbol | |
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| ID | 8227444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 4686485 |
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| End bp | 4688137 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644931690 |
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| Product | carboxyl-terminal protease |
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| Protein accession | YP_003088219 |
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| Protein GI | 255037598 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.614434 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.975749 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGT ATCTTCGTTC CATTTTGCTG GCAGCTCCGG TTGTGGGCGG GCTTGCATTC
GTTTCGTTCC GTCAGGACGA CCGCCTGTTT GAAATCGCGC GGAATCTGGA CATCTATGCC
ACGCTTTTCA AGGAATTGAA TGCGTATTAT GTGGATGAGA TTAACCCCAA CCTGCTCATC
AAAACGAGCA TCGACAACAT GCTCCGGTCC CTCGACCCGT ACACGGTATA TTATGCCGAG
GACGACATTG AGGACTACAT GACCATGACC ACCGGCAAGT ACAACGGGAT TGGCGCGATG
GTCAACTCCG CGGACGGCAA GCACACCGTG ATGATGGTGT ATGAAGATAC CCCCGCTCAG
AAAGCAGGAT TGCAGCTGGG CGACGAAATC ACGAAAATCA ACGACATCGA CCTTTCCACC
CGCGAGGATT TCGACACCGG GAAACTGCTC AAAGGCCAGA CTCAAACAGC CGTGAAGCTC
ACTGTGAAGC GCTACGGCAA CACCAAGCCG CTTGAAATTA CATTGAACCG CGACATCGTA
AAGGTAACTA ATGTGCCGTA CTACGGCATG CTGAACGAGG AAGTAGGCTA CATCGACCTG
AAAGATTTCA CCGCCAGCGC TTCCCGCGAA GTGCGCAATG CATTCCAGGA GTTGAAGGGC
AAAGGCATGA AATCCGTCGT GCTCGACCTG CGCGATAACC CCGGCGGCTT GCTGAATATG
GCGATCGAAA TTTCGAATAT ATTCATTCCA AAGGGCGAAG AAGTGGTTTC GACCAAAGGA
AAAGTGAGCG AATGGAACAA GACTTACACC GCTTACAACC CGGCACTCGA TACGGAGATC
CCTGTGGTGG TTTTGACCAA TAACCGCAGC GCCTCGGCCG CCGAAATCGT TTCGGGCGTG
ATCCAGGATT ACGACCGCGG CGTGCTGATC GGCCAGCGGA CTTACGGAAA AGGCCTTGTG
CAAACCACAC GCGACCTTTC TTTCAATACT AAAATGAAGA TCACCACCGC CAAATACTAC
ATCCCAAGCG GCCGGTGCAT CCAGGCGATT GATTACAGCC ACCGCAACGA CGACGGCAGC
GTGGGCAAAA TTCCCGATTC GCTGATGACC GAATTCAAGA CCAAAAATGG GCGAGTCGTA
TTCGATGGCG GTGGTATTTT GCCTGATATT ATTACTGAAA AAGAAAGCTA CTCGCCGCTG
GCCGTTTCGC TGGGCCGCAA CCGGCTGTTC TTCGACTACG CAGTGAAGTA CCATTTTGAG
CATCCGACGA TCAAGCCCGC GAAGGAATTC CAGCTGAGCG ACGCCGATTA TGCCGCATTT
ACCAAATGGC TGGGCGATAA GGAATACGAT TACACCACCC AGGTCGAGCG CGATCTGAAA
GACCTGGAAG CCTCGGCCAA AAAGGAAAAA TCGCTGGAAG TAATTGAGGA CCAATTGAAA
GCATTGAAAT CCAAACTATC ACACAGCAAG GATAACGATC TGCAAATCTT CAAACCGGAG
ATCAAAAAGA TCCTCGAAGA AGAGATCATC AAGCATTATT ACCTGGAAAA AGGCATGCGC
GAGGCTTCTT TCGACGAAGA TCCCGAAGTG AAAGCGGCGC TGGCACTATT CAAGGACCCG
GCCCGTTACG GCCACATTTT GAAAAAGAAA TAA
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| Protein sequence | MKKYLRSILL AAPVVGGLAF VSFRQDDRLF EIARNLDIYA TLFKELNAYY VDEINPNLLI
KTSIDNMLRS LDPYTVYYAE DDIEDYMTMT TGKYNGIGAM VNSADGKHTV MMVYEDTPAQ
KAGLQLGDEI TKINDIDLST REDFDTGKLL KGQTQTAVKL TVKRYGNTKP LEITLNRDIV
KVTNVPYYGM LNEEVGYIDL KDFTASASRE VRNAFQELKG KGMKSVVLDL RDNPGGLLNM
AIEISNIFIP KGEEVVSTKG KVSEWNKTYT AYNPALDTEI PVVVLTNNRS ASAAEIVSGV
IQDYDRGVLI GQRTYGKGLV QTTRDLSFNT KMKITTAKYY IPSGRCIQAI DYSHRNDDGS
VGKIPDSLMT EFKTKNGRVV FDGGGILPDI ITEKESYSPL AVSLGRNRLF FDYAVKYHFE
HPTIKPAKEF QLSDADYAAF TKWLGDKEYD YTTQVERDLK DLEASAKKEK SLEVIEDQLK
ALKSKLSHSK DNDLQIFKPE IKKILEEEII KHYYLEKGMR EASFDEDPEV KAALALFKDP
ARYGHILKKK
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