Gene Dfer_3842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3842 
Symbol 
ID8227436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4680445 
End bp4681206 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content48% 
IMG OID644931682 
ProductDolichyl-phosphate beta-D-mannosyltransferase 
Protein accessionYP_003088211 
Protein GI255037590 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.42785 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGATT GCATTGTAGT TATCCCTACC TACAACGAAC TTGAAAATGT GGAAGCCATC 
ATCCGGAAGG TTTTTAGCCT GAGCCATCCG TTTGATCTGT TGATCATAGA CGACGGGTCG
CCGGACGGCA CCGCAGGAGT TGTGAAAGAC CTCATGAAAG AATATCCGGG GCTTCATCTG
GTTGAAAGAA AGGGAAAACT CGGCCTGGGT ACTGCGTACA TCCACGGCTT CAAATGGGCG
CTCGAAAAAG GCTATAATTA TATTTTTGAA ATGGATGCCG ACTTCTCGCA TCCGCCCGAA
GACCTTGTGC GTCTTTACAA TGCGTGCGCC AACGAAGGCC ACGATGTAGC GGTTGGTTCG
CGCTACATTA CCGGTGTAAA TGTGGTGAAC TGGCCGATCA ACCGGGTATT GATGTCCTAT
TTCGCAGGCT ATTACGTGCG AATGATCACC GGCATGCCGA TCATGGACCC TACGGCCGGC
TTCATTTGCT ACACGGCCAA AGTGCTGAAC ACGATCAACC TCGACAACAT CCGGTTTATC
GGTTATGCAT TCCAGATCGA GATGAAATTC AACTCGTGGA AATACGGTTT CAGCATTACC
GAGGTGCCCA TCATCTTCAC CGACCGCACC AAAGGCGCCT CAAAAATGTC GAAAGGCATT
TTCAAGGAAG CCATCTTTGG TGTGATCACG TTGAAAATCA ACAGTTATTT CAAAAGGTAT
ATCCCTAAGC ATTCAACTCA GAAATTGCCA GCCAGCTCAT AA
 
Protein sequence
MNDCIVVIPT YNELENVEAI IRKVFSLSHP FDLLIIDDGS PDGTAGVVKD LMKEYPGLHL 
VERKGKLGLG TAYIHGFKWA LEKGYNYIFE MDADFSHPPE DLVRLYNACA NEGHDVAVGS
RYITGVNVVN WPINRVLMSY FAGYYVRMIT GMPIMDPTAG FICYTAKVLN TINLDNIRFI
GYAFQIEMKF NSWKYGFSIT EVPIIFTDRT KGASKMSKGI FKEAIFGVIT LKINSYFKRY
IPKHSTQKLP ASS